Literature DB >> 18567814

Minor-class splicing occurs in the nucleus of the Xenopus oocyte.

Kyle Friend, Nikolay G Kolev, Mei-Di Shu, Joan A Steitz.   

Abstract

A small fraction of premessenger RNA introns in certain eukaryotes is excised by the minor spliceosome, which contains low-abundance small nuclear ribonucleoproteins (snRNPs). Recently, it was suggested that minor-class snRNPs are localized to and function in the cytoplasm of vertebrate cells. To test whether U12-type splicing occurs in the cytoplasm of Xenopus oocytes, we performed microinjections of the well-characterized P120 minor-class splicing substrate into the nucleus or into the cytoplasm. Our results demonstrate that accurate splicing of this U12-dependent intron occurs exclusively in the nuclear compartment of the oocyte, where U12 and U6atac snRNPs are primarily localized. We further demonstrate that splicing of both a major-class and a minor-class intron is inhibited after nuclear envelope breakdown during meiosis.

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Year:  2008        PMID: 18567814      PMCID: PMC2491479          DOI: 10.1261/rna.1119708

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  25 in total

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Authors:  Chanseok Shin; James L Manley
Journal:  Cell       Date:  2002-11-01       Impact factor: 41.582

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Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-16       Impact factor: 11.205

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Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

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Journal:  Science       Date:  1988-09-09       Impact factor: 47.728

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Journal:  Development       Date:  1989-12       Impact factor: 6.868

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  8 in total

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Authors:  Heli K J Pessa; Dario Greco; Jouni Kvist; Gudrun Wahlström; Tapio I Heino; Petri Auvinen; Mikko J Frilander
Journal:  PLoS One       Date:  2010-10-11       Impact factor: 3.240

Review 2.  Cytoplasmic intron retention, function, splicing, and the sentinel RNA hypothesis.

Authors:  Peter T Buckley; Mugdha Khaladkar; Junhyong Kim; James Eberwine
Journal:  Wiley Interdiscip Rev RNA       Date:  2013-11-04       Impact factor: 9.957

Review 3.  Complexity of the alternative splicing landscape in plants.

Authors:  Anireddy S N Reddy; Yamile Marquez; Maria Kalyna; Andrea Barta
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

Review 4.  Remote control of gene function by local translation.

Authors:  Hosung Jung; Christos G Gkogkas; Nahum Sonenberg; Christine E Holt
Journal:  Cell       Date:  2014-03-27       Impact factor: 41.582

5.  Global analysis of the nuclear processing of transcripts with unspliced U12-type introns by the exosome.

Authors:  Elina H Niemelä; Ali Oghabian; Raymond H J Staals; Dario Greco; Ger J M Pruijn; Mikko J Frilander
Journal:  Nucleic Acids Res       Date:  2014-05-21       Impact factor: 16.971

6.  Rates of in situ transcription and splicing in large human genes.

Authors:  Jarnail Singh; Richard A Padgett
Journal:  Nat Struct Mol Biol       Date:  2009-10-11       Impact factor: 15.369

Review 7.  The significant other: splicing by the minor spliceosome.

Authors:  Janne J Turunen; Elina H Niemelä; Bhupendra Verma; Mikko J Frilander
Journal:  Wiley Interdiscip Rev RNA       Date:  2012-10-16       Impact factor: 9.957

8.  Lariat intronic RNAs in the cytoplasm of Xenopus tropicalis oocytes.

Authors:  Gaëlle J S Talhouarne; Joseph G Gall
Journal:  RNA       Date:  2014-07-22       Impact factor: 4.942

  8 in total

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