Literature DB >> 18564179

D-amino acids in the brain: structure and function of pyridoxal phosphate-dependent amino acid racemases.

Tohru Yoshimura1, Masaru Goto.   

Abstract

D-serine serves as a co-agonist of the N-methyl D-aspartate receptor in mammalian brains, and its behavior is probably related to neurological disorders such as schizophrenia, Alzheimer's disease and amyotrophic lateral sclerosis. D-Serine is synthesized by a pyridoxal 5'-phosphate (PLP)-dependent serine racemase. In this minireview, we provide a detailed discussion on the reaction mechanism of the PLP-dependent amino acid racemase on the basis of its 3D structure. We compared the eukaryotic serine racemase with bacterial alanine racemase, the best-studied enzyme among the PLP-dependent amino acid racemases, and thus suggested a putative reaction mechanism for mammalian D-serine synthesis.

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Year:  2008        PMID: 18564179     DOI: 10.1111/j.1742-4658.2008.06516.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  15 in total

1.  Expression, purification, and characterization of alanine racemase from Pseudomonas putida YZ-26.

Authors:  Jun-Lin Liu; Xiao-Qin Liu; Ya-Wei Shi
Journal:  World J Microbiol Biotechnol       Date:  2011-06-21       Impact factor: 3.312

2.  Probing the Catalytic Charge-Relay System in Alanine Racemase with Genetically Encoded Histidine Mimetics.

Authors:  Vangmayee Sharma; Yane-Shih Wang; Wenshe R Liu
Journal:  ACS Chem Biol       Date:  2016-11-15       Impact factor: 5.100

3.  A novel pyridoxal 5'-phosphate-dependent amino acid racemase in the Aplysia californica central nervous system.

Authors:  Liping Wang; Nobutoshi Ota; Elena V Romanova; Jonathan V Sweedler
Journal:  J Biol Chem       Date:  2011-02-22       Impact factor: 5.157

4.  Crystal structure of D-serine dehydratase from Escherichia coli.

Authors:  Darya V Urusova; Michail N Isupov; Svetlana Antonyuk; Galina S Kachalova; Galina Obmolova; Alexei A Vagin; Andrey A Lebedev; Gleb P Burenkov; Zbigniew Dauter; Hans D Bartunik; Victor S Lamzin; William R Melik-Adamyan; Thomas D Mueller; Klaus D Schnackerz
Journal:  Biochim Biophys Acta       Date:  2011-11-27

5.  TK1211 Encodes an Amino Acid Racemase towards Leucine and Methionine in the Hyperthermophilic Archaeon Thermococcus kodakarensis.

Authors:  Ren-Chao Zheng; Xia-Feng Lu; Hiroya Tomita; Shin-Ichi Hachisuka; Yu-Guo Zheng; Haruyuki Atomi
Journal:  J Bacteriol       Date:  2021-03-08       Impact factor: 3.490

6.  Crystal structure of a homolog of mammalian serine racemase from Schizosaccharomyces pombe.

Authors:  Masaru Goto; Takae Yamauchi; Nobuo Kamiya; Ikuko Miyahara; Tohru Yoshimura; Hisaaki Mihara; Tatsuo Kurihara; Ken Hirotsu; Nobuyoshi Esaki
Journal:  J Biol Chem       Date:  2009-07-28       Impact factor: 5.157

7.  Identification, purification, and characterization of a novel amino acid racemase, isoleucine 2-epimerase, from Lactobacillus species.

Authors:  Yuta Mutaguchi; Taketo Ohmori; Taisuke Wakamatsu; Katsumi Doi; Toshihisa Ohshima
Journal:  J Bacteriol       Date:  2013-09-13       Impact factor: 3.490

8.  The structure of mammalian serine racemase: evidence for conformational changes upon inhibitor binding.

Authors:  Myron A Smith; Volker Mack; Andreas Ebneth; Isabel Moraes; Brunella Felicetti; Michael Wood; Dorian Schonfeld; Owen Mather; Andrea Cesura; John Barker
Journal:  J Biol Chem       Date:  2010-01-27       Impact factor: 5.157

Review 9.  Emerging knowledge of regulatory roles of D-amino acids in bacteria.

Authors:  Felipe Cava; Hubert Lam; Miguel A de Pedro; Matthew K Waldor
Journal:  Cell Mol Life Sci       Date:  2010-12-14       Impact factor: 9.261

10.  Drosophila selenophosphate synthetase 1 regulates vitamin B6 metabolism: prediction and confirmation.

Authors:  Kwang Hee Lee; Myoung Sup Shim; Jin Young Kim; Hee Kyoung Jung; Eunji Lee; Bradley A Carlson; Xue-Ming Xu; Jin Mo Park; Dolph L Hatfield; Taesung Park; Byeong Jae Lee
Journal:  BMC Genomics       Date:  2011-08-24       Impact factor: 3.969

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