Literature DB >> 18562034

Mitochondrial plasmids of sugar beet amplified via rolling circle method detected during curtovirus screening.

Maria Homs1, Sigrid Kober, Gabi Kepp, Holger Jeske.   

Abstract

Crops of sugar beet have been considerably impaired by infection with Beet curly top virus (BCTV) during the past decades. Quick and reliable diagnostic techniques are therefore desirable to detect this circular single-stranded DNA-containing geminivirus. Techniques combining either tissue printing or blot hybridization, or rolling circle amplification (RCA) and restriction fragment length polymorphism (RFLP) were compared. Although they easily detected BCTV with certainty, both exhibited apparent false positive results which have been scrutinized in closer detail. Uninfected control plants revealed unspecific signals due to probe attachment on tissue blots, and dominant fragment patterns upon RCA/RFLP which did not hybridize with BCTV-specific probes. Cloning and sequencing of these DNA fragments showed that they were amplified from mitochondrial plasmids. Examination of their genome structure revealed no relationship with geminiviruses or their satellites.

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Year:  2008        PMID: 18562034     DOI: 10.1016/j.virusres.2008.04.027

Source DB:  PubMed          Journal:  Virus Res        ISSN: 0168-1702            Impact factor:   3.303


  8 in total

1.  Conformation-selective methylation of geminivirus DNA.

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Journal:  J Virol       Date:  2011-08-10       Impact factor: 5.103

Review 2.  Viruses of Yams (Dioscorea spp.): Current Gaps in Knowledge and Future Research Directions to Improve Disease Management.

Authors:  Mame Boucar Diouf; Ruth Festus; Gonçalo Silva; Sébastien Guyader; Marie Umber; Susan Seal; Pierre Yves Teycheney
Journal:  Viruses       Date:  2022-08-26       Impact factor: 5.818

Review 3.  A Review of Viruses Infecting Yam (Dioscorea spp.).

Authors:  Guo-Fu Luo; Ana Podolyan; Dawit B Kidanemariam; Carmel Pilotti; Gary Houliston; Amit C Sukal
Journal:  Viruses       Date:  2022-03-23       Impact factor: 5.818

4.  Rolling circle amplification-based analysis of Sri Lankan cassava mosaic virus isolates from Tamil Nadu, India, suggests a low level of genetic variability.

Authors:  Akhilesh Kumar Kushawaha; Ramalingam Rabindran; Indranil Dasgupta
Journal:  Virusdisease       Date:  2018-02-01

5.  A melting pot of Old World begomoviruses and their satellites infecting a collection of Gossypium species in Pakistan.

Authors:  Muhammad Shah Nawaz-ul-Rehman; Rob W Briddon; Claude M Fauquet
Journal:  PLoS One       Date:  2012-08-10       Impact factor: 3.240

6.  A Sequence-Independent Strategy for Amplification and Characterisation of Episomal Badnavirus Sequences Reveals Three Previously Uncharacterised Yam Badnaviruses.

Authors:  Moritz Bömer; Aliyu A Turaki; Gonçalo Silva; P Lava Kumar; Susan E Seal
Journal:  Viruses       Date:  2016-07-07       Impact factor: 5.048

Review 7.  Barcoding of Plant Viruses with Circular Single-Stranded DNA Based on Rolling Circle Amplification.

Authors:  Holger Jeske
Journal:  Viruses       Date:  2018-08-31       Impact factor: 5.048

8.  Characterization, phylogeny and recombination analysis of Pedilanthus leaf curl virus-Petunia isolate and its associated betasatellite.

Authors:  Sara Shakir; Muhammad Shah Nawaz-Ul-Rehman; Muhammad Mubin; Zulfiqar Ali
Journal:  Virol J       Date:  2018-08-31       Impact factor: 4.099

  8 in total

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