Literature DB >> 18560176

Molecular assessment of genetic diversity in mung bean germplasm.

G Roopa Lavanya1, Jyoti Srivastava, Shirish A Ranade.   

Abstract

RAPD profiles were used to identify the extent of diversity among 54 accessions of mung bean that included both improved and local land races. Out of the 40 primers screened, seven primers generated 174 amplification products with an average of 24.85 bands per primer. The RAPD profiles were analysed for Jaccard's similarity coefficients that was found to be in the range from 0 to 0.48, indicating the presence of wide range of genetic diversity at molecular level. Cluster analysis was carried out based on distances (1-similarity coefficient) using neighbour-joining method in Free Tree package. The dendrogram resolved all the accessions into two major clusters, I (with 11 accessions) and II (with 43 accessions). However, the cluster was further divided into four subclusters (II A with six, II B with nine, II C with 15 and II D with 13 accessions). The distribution of the accessions in different clusters and subclusters appears to be related to their performance in field conditions for 10 morphological traits that were scored. This study indicated that the RAPD profiles provide an easy and simple technique for preliminary genetic diversity assessment of mung bean accessions that may reflect morphological trait differences among them.

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Year:  2008        PMID: 18560176     DOI: 10.1007/s12041-008-0009-3

Source DB:  PubMed          Journal:  J Genet        ISSN: 0022-1333            Impact factor:   1.166


  5 in total

1.  Free-Tree--freeware program for construction of phylogenetic trees on the basis of distance data and bootstrap/jackknife analysis of the tree robustness. Application in the RAPD analysis of genus Frenkelia.

Authors:  A Pavlícek; S Hrdá; J Flegr
Journal:  Folia Biol (Praha)       Date:  1999       Impact factor: 0.906

2.  Random amplified polymorphic DNA (RAPD) analysis in Indian mung bean (Vigna radiata (L.) Wilczek) cultivars.

Authors:  S Lakhanpaul; S Chadha; K V Bhat
Journal:  Genetica       Date:  2000       Impact factor: 1.082

3.  Detection of genetic diversity in tea (Camellia sinensis) using RAPD markers.

Authors:  F N Wachira; R Waugh; C A Hackett; W Powell
Journal:  Genome       Date:  1995-04       Impact factor: 2.166

4.  Use of RAPD for the study of diversity within plant germplasm collections.

Authors:  P S Virk; B V Ford-Lloyd; M T Jackson; H J Newbury
Journal:  Heredity (Edinb)       Date:  1995-02       Impact factor: 3.821

5.  Detection of genetic diversity and selective gene introgression in coffee using RAPD markers.

Authors:  C Orozco-Castillo; K J Chalmers; R Waugh; W Powell
Journal:  Theor Appl Genet       Date:  1994-03       Impact factor: 5.699

  5 in total
  5 in total

1.  Molecular characterization of Vigna radiata (L.) Wilczek genotypes based on nuclear ribosomal DNA and RAPD polymorphism.

Authors:  Aparna Raturi; S K Singh; Vinay Sharma; Rakesh Pathak
Journal:  Mol Biol Rep       Date:  2011-06-11       Impact factor: 2.316

2.  Sequence related amplified polymorphism (SRAP) analysis for genetic diversity and micronutrient content among gene pools in mungbean [Vigna radiata (L.) Wilczek].

Authors:  Bharti Aneja; Neelam R Yadav; Ram C Yadav; Ram Kumar
Journal:  Physiol Mol Biol Plants       Date:  2013-07

3.  Molecular assessment of genetic diversity in cluster bean (Cyamopsis tetragonoloba) genotypes.

Authors:  Rakesh Pathak; S K Singh; Manjit Singh; A Henry
Journal:  J Genet       Date:  2010-08       Impact factor: 1.166

4.  Application of Wavelet Packet Transform to detect genetic polymorphisms by the analysis of inter-Alu PCR patterns.

Authors:  Maurizio Cardelli; Matteo Nicoli; Armando Bazzani; Claudio Franceschi
Journal:  BMC Bioinformatics       Date:  2010-12-09       Impact factor: 3.169

5.  Genetic Diversity and Population Structure Analysis of the USDA Olive Germplasm Using Genotyping-By-Sequencing (GBS).

Authors:  A S M Faridul Islam; Dean Sanders; Amit Kumar Mishra; Vijay Joshi
Journal:  Genes (Basel)       Date:  2021-12-17       Impact factor: 4.096

  5 in total

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