Literature DB >> 18554500

Domain architecture of the atypical Arf-family GTPase Arl13b involved in cilia formation.

Yuji Hori1, Tetsuo Kobayashi, Yorifumi Kikko, Kenji Kontani, Toshiaki Katada.   

Abstract

Arl13b is an atypical Arf/Arl-family GTPase consisting of an extending large C-terminal region (C domain) and Arf-homologous GTP-binding motifs in the N terminus (N domain). Although Arl13b appears to be involved in cilia formation, its precise function and roles of the domains remain unknown. Here, we show the unique domain architecture of Arl13b by analyzing the relationship between its biochemical properties and cilia formation. Arl13b binds guanine nucleotides and specifically localizes to cilia. The ciliary localization of Arl13b requires both N and C domains but is independent of its guanine nucleotide-binding ability. Arl13b is capable of self-associating via N domain, and overexpression of N domain inhibits not only cilia formation but also the maintenance of pre-generated cilia. These findings suggest that N and C domains of Arl13b cooperatively regulate its ciliary localization and that N domain-dependent self-association of Arl13b may be important for its function in cilia biogenesis.

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Year:  2008        PMID: 18554500     DOI: 10.1016/j.bbrc.2008.06.001

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  33 in total

1.  Arl13b Promotes Gastric Tumorigenesis by Regulating Smo Trafficking and Activation of the Hedgehog Signaling Pathway.

Authors:  Jia Shao; Linlin Xu; Limin Chen; Quqin Lu; Xinsheng Xie; Wei Shi; Huanting Xiong; Chao Shi; Xuan Huang; Jinhong Mei; Hai Rao; Hua Lu; Nonghua Lu; Shiwen Luo
Journal:  Cancer Res       Date:  2017-06-13       Impact factor: 12.701

2.  ARL13B, a Joubert Syndrome-Associated Protein, Is Critical for Retinogenesis and Elaboration of Mouse Photoreceptor Outer Segments.

Authors:  Tanya L Dilan; Abigail R Moye; Ezequiel M Salido; Thamaraiselvi Saravanan; Saravanan Kolandaivelu; Andrew F X Goldberg; Visvanathan Ramamurthy
Journal:  J Neurosci       Date:  2018-12-20       Impact factor: 6.167

3.  The Joubert syndrome protein ARL13B binds tubulin to maintain uniform distribution of proteins along the ciliary membrane.

Authors:  Ekaterina Revenkova; Qing Liu; G Luca Gusella; Carlo Iomini
Journal:  J Cell Sci       Date:  2018-05-04       Impact factor: 5.285

4.  Biochemical characterization of purified mammalian ARL13B protein indicates that it is an atypical GTPase and ARL3 guanine nucleotide exchange factor (GEF).

Authors:  Anna A Ivanova; Tamara Caspary; Nicholas T Seyfried; Duc M Duong; Andrew B West; Zhiyong Liu; Richard A Kahn
Journal:  J Biol Chem       Date:  2017-05-09       Impact factor: 5.157

5.  Arl13b regulates endocytic recycling traffic.

Authors:  Duarte C Barral; Salil Garg; Cristina Casalou; Gerald F M Watts; José L Sandoval; José S Ramalho; Victor W Hsu; Michael B Brenner
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-07       Impact factor: 11.205

6.  Cilia localization is essential for in vivo functions of the Joubert syndrome protein Arl13b/Scorpion.

Authors:  Neil A Duldulao; Sunjin Lee; Zhaoxia Sun
Journal:  Development       Date:  2009-12       Impact factor: 6.868

7.  Joubert syndrome Arl13b functions at ciliary membranes and stabilizes protein transport in Caenorhabditis elegans.

Authors:  Sebiha Cevik; Yuji Hori; Oktay I Kaplan; Katarzyna Kida; Tiina Toivenon; Christian Foley-Fisher; David Cottell; Toshiaki Katada; Kenji Kontani; Oliver E Blacque
Journal:  J Cell Biol       Date:  2010-03-15       Impact factor: 10.539

8.  ARL13B, PDE6D, and CEP164 form a functional network for INPP5E ciliary targeting.

Authors:  Melissa C Humbert; Katie Weihbrecht; Charles C Searby; Yalan Li; Robert M Pope; Val C Sheffield; Seongjin Seo
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-12       Impact factor: 11.205

9.  Arl13b in primary cilia regulates the migration and placement of interneurons in the developing cerebral cortex.

Authors:  Holden Higginbotham; Tae-Yeon Eom; Laura E Mariani; Amelia Bachleda; Joshua Hirt; Vladimir Gukassyan; Corey L Cusack; Cary Lai; Tamara Caspary; E S Anton
Journal:  Dev Cell       Date:  2012-11-13       Impact factor: 12.270

10.  Disruption of the ciliary GTPase Arl13b suppresses Sonic hedgehog overactivation and inhibits medulloblastoma formation.

Authors:  Sarah N Bay; Alyssa B Long; Tamara Caspary
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-29       Impact factor: 11.205

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