Literature DB >> 18551704

Equations and calculations for fermentations of butyric acid bacteria.

E T Papoutsakis1.   

Abstract

A stoichiometric equation has been derived which describes the interrelations among the various products and biomass in fermentations of butyric acid bacteria. The derivation of the equation is based on an assumed ATP yield, two biological regularities, and the biochemistry of product formation of the fermentations. The equation obeys the constraints imposed on growth and product formation by thermodynamics and the biochemical topology. The validity of the equation is tested using a variety of fermentation data from the literature. The uses, improvements, limitations, and extensions of the equation are also discussed in detail. For example, the fermentation equation is used to calculate the maximal possible yields of the main fermentation products.

Entities:  

Year:  1984        PMID: 18551704     DOI: 10.1002/bit.260260210

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  42 in total

1.  Metabolic control analysis under uncertainty: framework development and case studies.

Authors:  Liqing Wang; Inanç Birol; Vassily Hatzimanikatis
Journal:  Biophys J       Date:  2004-10-01       Impact factor: 4.033

2.  OptStrain: a computational framework for redesign of microbial production systems.

Authors:  Priti Pharkya; Anthony P Burgard; Costas D Maranas
Journal:  Genome Res       Date:  2004-11       Impact factor: 9.043

Review 3.  The use of stoichiometric relations for the description and analysis of microbial cultures.

Authors:  J A de Hollander
Journal:  Antonie Van Leeuwenhoek       Date:  1991 Oct-Nov       Impact factor: 2.271

4.  Thermodynamics-based metabolic flux analysis.

Authors:  Christopher S Henry; Linda J Broadbelt; Vassily Hatzimanikatis
Journal:  Biophys J       Date:  2006-12-15       Impact factor: 4.033

5.  On the topological features of optimal metabolic pathway regimes.

Authors:  S M See; J P Dean; G Dervakos
Journal:  Appl Biochem Biotechnol       Date:  1996-09       Impact factor: 2.926

6.  A non-passive mechanism of butyrate excretion operates during acidogenic fermentation of methanol by Eubacterium limosum.

Authors:  P Loubiere; G Goma; N D Lindley
Journal:  Antonie Van Leeuwenhoek       Date:  1990-02       Impact factor: 2.271

7.  Metabolic engineering of Clostridium acetobutylicum ATCC 824 for isopropanol-butanol-ethanol fermentation.

Authors:  Joungmin Lee; Yu-Sin Jang; Sung Jun Choi; Jung Ae Im; Hyohak Song; Jung Hee Cho; Do Young Seung; E Terry Papoutsakis; George N Bennett; Sang Yup Lee
Journal:  Appl Environ Microbiol       Date:  2011-12-30       Impact factor: 4.792

8.  Heterologous Expression of the Clostridium carboxidivorans CO Dehydrogenase Alone or Together with the Acetyl Coenzyme A Synthase Enables both Reduction of CO2 and Oxidation of CO by Clostridium acetobutylicum.

Authors:  Ellinor D Carlson; Eleftherios T Papoutsakis
Journal:  Appl Environ Microbiol       Date:  2017-08-01       Impact factor: 4.792

9.  Genome-scale model for Clostridium acetobutylicum: Part I. Metabolic network resolution and analysis.

Authors:  Ryan S Senger; Eleftherios T Papoutsakis
Journal:  Biotechnol Bioeng       Date:  2008-12-01       Impact factor: 4.530

10.  Genome-scale model for Clostridium acetobutylicum: Part II. Development of specific proton flux states and numerically determined sub-systems.

Authors:  Ryan S Senger; Eleftherios T Papoutsakis
Journal:  Biotechnol Bioeng       Date:  2008-12-01       Impact factor: 4.530

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