Literature DB >> 18540074

Expression, purification and preliminary diffraction studies of PhnP.

Kateryna Podzelinska1, Shumei He, Alexei Soares, David Zechel, Bjarne Hove-Jensen, Zongchao Jia.   

Abstract

PhnP belongs to a 14-gene operon that supports the growth of Escherichia coli on alkylphosphonates as a sole source of phosphorus; however, the exact biochemistry of phosphonate degradation by this pathway is poorly understood. The protein was recombinantly expressed in Escherichia coli and purified to homogeneity. Sitting-drop vapour diffusion in combination with microseeding was used to obtain crystals that were suitable for X-ray diffraction. Data were collected to 1.3 A and the crystals belonged to space group C2, with unit-cell parameters a = 111.65, b = 75.41, c = 83.23 A, alpha = gamma = 90, beta = 126.3 degrees .

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18540074      PMCID: PMC2496866          DOI: 10.1107/S1744309108014656

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  11 in total

1.  Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.

Authors:  Bjarne Hove-Jensen; Tina J Rosenkrantz; Andreas Haldimann; Barry L Wanner
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

2.  A simple method for improving protein solubility and long-term stability.

Authors:  Alexander P Golovanov; Guillaume M Hautbergue; Stuart A Wilson; Lu-Yun Lian
Journal:  J Am Chem Soc       Date:  2004-07-28       Impact factor: 15.419

3.  Identification of cognate ligands for the Escherichia coli phnD protein product and engineering of a reagentless fluorescent biosensor for phosphonates.

Authors:  Shahir S Rizk; Matthew J Cuneo; Homme W Hellinga
Journal:  Protein Sci       Date:  2006-06-02       Impact factor: 6.725

Review 4.  Life in the fast lane for protein crystallization and X-ray crystallography.

Authors:  Marc L Pusey; Zhi-Jie Liu; Wolfram Tempel; Jeremy Praissman; Dawei Lin; Bi-Cheng Wang; José A Gavira; Joseph D Ng
Journal:  Prog Biophys Mol Biol       Date:  2005-07       Impact factor: 3.667

5.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Functional annotation and kinetic characterization of PhnO from Salmonella enterica.

Authors:  James C Errey; John S Blanchard
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

8.  Mapping and molecular cloning of the phn (psiD) locus for phosphonate utilization in Escherichia coli.

Authors:  B L Wanner; J A Boline
Journal:  J Bacteriol       Date:  1990-03       Impact factor: 3.490

9.  Mutational analysis of an Escherichia coli fourteen-gene operon for phosphonate degradation, using TnphoA' elements.

Authors:  W W Metcalf; B L Wanner
Journal:  J Bacteriol       Date:  1993-06       Impact factor: 3.490

10.  Differential regulation of high-affinity phosphate transport systems of Mycobacterium smegmatis: identification of PhnF, a repressor of the phnDCE operon.

Authors:  Susanne Gebhard; Gregory M Cook
Journal:  J Bacteriol       Date:  2007-12-14       Impact factor: 3.490

View more
  3 in total

Review 1.  Utilization of glyphosate as phosphate source: biochemistry and genetics of bacterial carbon-phosphorus lyase.

Authors:  Bjarne Hove-Jensen; David L Zechel; Bjarne Jochimsen
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

2.  Accumulation of intermediates of the carbon-phosphorus lyase pathway for phosphonate degradation in phn mutants of Escherichia coli.

Authors:  Bjarne Hove-Jensen; Tina J Rosenkrantz; David L Zechel; Martin Willemoës
Journal:  J Bacteriol       Date:  2010-01       Impact factor: 3.490

3.  Structure of PhnP, a phosphodiesterase of the carbon-phosphorus lyase pathway for phosphonate degradation.

Authors:  Kateryna Podzelinska; Shu-Mei He; Matthew Wathier; Alexander Yakunin; Michael Proudfoot; Bjarne Hove-Jensen; David L Zechel; Zongchao Jia
Journal:  J Biol Chem       Date:  2009-04-14       Impact factor: 5.157

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.