Literature DB >> 18539789

Transcriptome analysis of the Lactococcus lactis ArgR and AhrC regulons.

Rasmus Larsen1, Sacha A F T van Hijum, Jan Martinussen, Oscar P Kuipers, Jan Kok.   

Abstract

In previous studies, we have shown that direct protein-protein interaction between the two regulators ArgR and AhrC in Lactococcus lactis is required for arginine-dependent repression of the biosynthetic argC promoter and the activation of the catabolic arcA promoter. Here, we establish the global ArgR and AhrC regulons by transcriptome analyses and show that both regulators are dedicated to the control of arginine metabolism in L. lactis.

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Year:  2008        PMID： 18539789      PMCID： PMC2519338          DOI： 10.1128/AEM.00117-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  18 in total

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Authors:  J Martinussen; J Schallert; B Andersen; K Hammer
Journal:  J Bacteriol       Date:  2001-05       Impact factor: 3.490

2.  A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes.

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3.  Evolution of arginine deiminase (ADI) pathway genes.

Authors:  Manuel Zúñiga; Gaspar Pérez; Fernando González-Candelas
Journal:  Mol Phylogenet Evol       Date:  2002-12       Impact factor: 4.286

4.  The Lactococcus lactis CodY regulon: identification of a conserved cis-regulatory element.

Authors:  Chris D den Hengst; Sacha A F T van Hijum; Jan M W Geurts; Arjen Nauta; Jan Kok; Oscar P Kuipers
Journal:  J Biol Chem       Date:  2005-07-21       Impact factor: 5.157

5.  Transcription regulation in thermophilic bacteria: high resolution contact probing of Bacillus stearothermophilus and Thermotoga neapolitana arginine repressor-operator interactions.

Authors:  Hui Song; Haifeng Wang; Daniel Gigot; Diliana Dimova; Vehary Sakanyan; Nicolas Glansdorff; Daniel Charlier
Journal:  J Mol Biol       Date:  2002-01-18       Impact factor: 5.469

6.  Interaction between ArgR and AhrC controls regulation of arginine metabolism in Lactococcus lactis.

Authors:  Rasmus Larsen; Jan Kok; Oscar P Kuipers
Journal:  J Biol Chem       Date:  2005-03-04       Impact factor: 5.157

7.  ArgR and AhrC are both required for regulation of arginine metabolism in Lactococcus lactis.

Authors:  Rasmus Larsen; Girbe Buist; Oscar P Kuipers; Jan Kok
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

Review 8.  The arginine repressor of Escherichia coli.

Authors:  W K Maas
Journal:  Microbiol Rev       Date:  1994-12

Review 9.  Transcriptome analysis and related databases of Lactococcus lactis.

Authors:  Oscar P Kuipers; Anne de Jong; Richard J S Baerends; Sacha A F T van Hijum; Aldert L Zomer; Harma A Karsens; Chris D den Hengst; Naomi E Kramer; Girbe Buist; Jan Kok
Journal:  Antonie Van Leeuwenhoek       Date:  2002-08       Impact factor: 2.271

10.  Genome2D: a visualization tool for the rapid analysis of bacterial transcriptome data.

Authors:  Richard J S Baerends; Wiep Klaas Smits; Anne de Jong; Leendert W Hamoen; Jan Kok; Oscar P Kuipers
Journal:  Genome Biol       Date:  2004-04-05       Impact factor: 13.583
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  14 in total

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Journal:  Appl Environ Microbiol       Date:  2015-08-28       Impact factor: 4.792

2.  Genome-wide comprehensive analysis of transcriptional regulation by ArgR in Thermus thermophilus.

Authors:  Naoki Iwanaga; Kaori Ide; Takeshi Nagashima; Takeo Tomita; Yoshihiro Agari; Akeo Shinkai; Seiki Kuramitsu; Mariko Okada-Hatakeyema; Tomohisa Kuzuyama; Makoto Nishiyama
Journal:  Extremophiles       Date:  2014-07-29       Impact factor: 2.395

3.  Genetic response to bacteriophage infection in Lactococcus lactis reveals a four-strand approach involving induction of membrane stress proteins, D-alanylation of the cell wall, maintenance of proton motive force, and energy conservation.

Authors:  Vincenzo Fallico; R Paul Ross; Gerald F Fitzgerald; Olivia McAuliffe
Journal:  J Virol       Date:  2011-08-31       Impact factor: 5.103

4.  Regulation of arginine acquisition and virulence gene expression in the human pathogen Streptococcus pneumoniae by transcription regulators ArgR1 and AhrC.

Authors:  Tomas G Kloosterman; Oscar P Kuipers
Journal:  J Biol Chem       Date:  2011-11-14       Impact factor: 5.157

5.  Transcriptome, proteome, and metabolite analyses of a lactate dehydrogenase-negative mutant of Enterococcus faecalis V583.

Authors:  Ibrahim Mehmeti; Maria Jönsson; Ellen M Fergestad; Geir Mathiesen; Ingolf F Nes; Helge Holo
Journal:  Appl Environ Microbiol       Date:  2011-02-04       Impact factor: 4.792

6.  AhrC and Eep are biofilm infection-associated virulence factors in Enterococcus faecalis.

Authors:  Kristi L Frank; Pascale S Guiton; Aaron M T Barnes; Dawn A Manias; Olivia N Chuang-Smith; Petra L Kohler; Adam R Spaulding; Scott J Hultgren; Patrick M Schlievert; Gary M Dunny
Journal:  Infect Immun       Date:  2013-03-04       Impact factor: 3.441

7.  ArgR of Streptomyces coelicolor is a versatile regulator.

Authors:  Rosario Pérez-Redondo; Antonio Rodríguez-García; Alma Botas; Irene Santamarta; Juan F Martín; Paloma Liras
Journal:  PLoS One       Date:  2012-03-05       Impact factor: 3.240

8.  Regulation of the arginine deiminase system by ArgR2 interferes with arginine metabolism and fitness of Streptococcus pneumoniae.

Authors:  Christian Schulz; Philipp Gierok; Lothar Petruschka; Michael Lalk; Ulrike Mäder; Sven Hammerschmidt
Journal:  MBio       Date:  2014-12-23       Impact factor: 7.867

9.  Transcriptome landscape of Lactococcus lactis reveals many novel RNAs including a small regulatory RNA involved in carbon uptake and metabolism.

Authors:  Sjoerd B van der Meulen; Anne de Jong; Jan Kok
Journal:  RNA Biol       Date:  2016-03-07       Impact factor: 4.652

10.  ArgR of Streptomyces coelicolor Is a Pleiotropic Transcriptional Regulator: Effect on the Transcriptome, Antibiotic Production, and Differentiation in Liquid Cultures.

Authors:  Alma Botas; Rosario Pérez-Redondo; Antonio Rodríguez-García; Rubén Álvarez-Álvarez; Paula Yagüe; Angel Manteca; Paloma Liras
Journal:  Front Microbiol       Date:  2018-03-01       Impact factor: 5.640
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