Literature DB >> 18536726

Molecular mechanism of energy conservation in polysulfide respiration.

Mika Jormakka1, Ken Yokoyama, Takahiro Yano, Masatada Tamakoshi, Satoru Akimoto, Tatsuro Shimamura, Paul Curmi, So Iwata.   

Abstract

Bacterial polysulfide reductase (PsrABC) is an integral membrane protein complex responsible for quinone-coupled reduction of polysulfide, a process important in extreme environments such as deep-sea vents and hot springs. We determined the structure of polysulfide reductase from Thermus thermophilus at 2.4-A resolution, revealing how the PsrA subunit recognizes and reduces its unique polyanionic substrate. The integral membrane subunit PsrC was characterized using the natural substrate menaquinone-7 and inhibitors, providing a comprehensive representation of a quinone binding site and revealing the presence of a water-filled cavity connecting the quinone binding site on the periplasmic side to the cytoplasm. These results suggest that polysulfide reductase could be a key energy-conserving enzyme of the T. thermophilus respiratory chain, using polysulfide as the terminal electron acceptor and pumping protons across the membrane via a previously unknown mechanism.

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Year:  2008        PMID: 18536726      PMCID: PMC2887006          DOI: 10.1038/nsmb.1434

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  53 in total

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4.  Structural differences between mesophilic, moderately thermophilic and extremely thermophilic protein subunits: results of a comprehensive survey.

Authors:  A Szilágyi; P Závodszky
Journal:  Structure       Date:  2000-05-15       Impact factor: 5.006

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Authors:  Russ Hille
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

6.  Automated protein model building combined with iterative structure refinement.

Authors:  A Perrakis; R Morris; V S Lamzin
Journal:  Nat Struct Biol       Date:  1999-05

7.  Structure and mechanism of the aberrant ba(3)-cytochrome c oxidase from thermus thermophilus.

Authors:  T Soulimane; G Buse; G P Bourenkov; H D Bartunik; R Huber; M E Than
Journal:  EMBO J       Date:  2000-04-17       Impact factor: 11.598

Review 8.  Molybdenum enzymes.

Authors:  R Hille
Journal:  Essays Biochem       Date:  1999       Impact factor: 8.000

9.  The genetic basis of tetrathionate respiration in Salmonella typhimurium.

Authors:  M Hensel; A P Hinsley; T Nikolaus; G Sawers; B C Berks
Journal:  Mol Microbiol       Date:  1999-04       Impact factor: 3.501

10.  The function of methyl-menaquinone-6 and polysulfide reductase membrane anchor (PsrC) in polysulfide respiration of Wolinella succinogenes.

Authors:  Wiebke Dietrich; Oliver Klimmek
Journal:  Eur J Biochem       Date:  2002-02
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  53 in total

Review 1.  Structures of membrane proteins.

Authors:  Kutti R Vinothkumar; Richard Henderson
Journal:  Q Rev Biophys       Date:  2010-02       Impact factor: 5.318

2.  The Qrc membrane complex, related to the alternative complex III, is a menaquinone reductase involved in sulfate respiration.

Authors:  Sofia S Venceslau; Rita R Lino; Ines A C Pereira
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

3.  On the evolution and physiology of cable bacteria.

Authors:  Kasper U Kjeldsen; Lars Schreiber; Casper A Thorup; Thomas Boesen; Jesper T Bjerg; Tingting Yang; Morten S Dueholm; Steffen Larsen; Nils Risgaard-Petersen; Marta Nierychlo; Markus Schmid; Andreas Bøggild; Jack van de Vossenberg; Jeanine S Geelhoed; Filip J R Meysman; Michael Wagner; Per H Nielsen; Lars Peter Nielsen; Andreas Schramm
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-19       Impact factor: 11.205

4.  Structure of Escherichia coli succinate:quinone oxidoreductase with an occupied and empty quinone-binding site.

Authors:  Jonathan Ruprecht; Victoria Yankovskaya; Elena Maklashina; So Iwata; Gary Cecchini
Journal:  J Biol Chem       Date:  2009-08-25       Impact factor: 5.157

Review 5.  Shifting the metallocentric molybdoenzyme paradigm: the importance of pyranopterin coordination.

Authors:  Richard A Rothery; Joel H Weiner
Journal:  J Biol Inorg Chem       Date:  2014-09-30       Impact factor: 3.358

6.  Unraveling the inner workings of respiratory arsenate reductase.

Authors:  John F Stolz; Partha Basu
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-27       Impact factor: 11.205

7.  Pyranopterin Coordination Controls Molybdenum Electrochemistry in Escherichia coli Nitrate Reductase.

Authors:  Sheng-Yi Wu; Richard A Rothery; Joel H Weiner
Journal:  J Biol Chem       Date:  2015-08-21       Impact factor: 5.157

8.  A molybdopterin oxidoreductase is involved in H2 oxidation in Desulfovibrio desulfuricans G20.

Authors:  Xiangzhen Li; Qingwei Luo; Neil Q Wofford; Kimberly L Keller; Michael J McInerney; Judy D Wall; Lee R Krumholz
Journal:  J Bacteriol       Date:  2009-02-20       Impact factor: 3.490

9.  Structural insights into ubiquinone biosynthesis in membranes.

Authors:  Wei Cheng; Weikai Li
Journal:  Science       Date:  2014-02-21       Impact factor: 47.728

10.  Protein crystallography reveals a role for the FS0 cluster of Escherichia coli nitrate reductase A (NarGHI) in enzyme maturation.

Authors:  Richard A Rothery; Michela G Bertero; Thomas Spreter; Nasim Bouromand; Natalie C J Strynadka; Joel H Weiner
Journal:  J Biol Chem       Date:  2010-01-06       Impact factor: 5.157

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