Literature DB >> 18533813

Mutual information expansion for studying the role of correlations in population codes: how important are autocorrelations?

A Scaglione1, G Foffani, G Scannella, S Cerutti, K A Moxon.   

Abstract

The role of correlations in the activity of neural populations responding to a set of stimuli can be studied within an information theory framework. Regardless of whether one approaches the problem from an encoding or decoding perspective, the main measures used to study the role of correlations can be derived from a common source: the expansion of the mutual information. Two main formalisms of mutual information expansion have been proposed: the series expansion and the exact breakdown. Here we clarify that these two formalisms have a different representation of autocorrelations, so that even when the total information estimated differs by less than 1%, individual terms can diverge. More precisely, the series expansion explicitly evaluates the informational contribution of autocorrelations in the count of spikes, that is, count autocorrelations, whereas the exact breakdown does not. We propose a new formalism of mutual information expansion, the Poisson exact breakdown, which introduces Poisson equivalents in order to explicitly evaluate the informational contribution of count autocorrelations with no approximation involved. Because several widely employed manipulations of spike trains, most notably binning and pooling, alter the structure of count autocorrelations, the new formalism can provide a useful general framework for studying the role of correlations in population codes.

Mesh:

Year:  2008        PMID: 18533813     DOI: 10.1162/neco.2008.08-07-595

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  5 in total

1.  Trial-to-trial variability in the responses of neurons carries information about stimulus location in the rat whisker thalamus.

Authors:  Alessandro Scaglione; Karen A Moxon; Juan Aguilar; Guglielmo Foffani
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-22       Impact factor: 11.205

2.  A maximum entropy test for evaluating higher-order correlations in spike counts.

Authors:  Arno Onken; Valentin Dragoi; Klaus Obermayer
Journal:  PLoS Comput Biol       Date:  2012-06-07       Impact factor: 4.475

3.  Information Carried by Population Spike Times in the Whisker Sensory Cortex can be Decoded Without Knowledge of Stimulus Time.

Authors:  Stefano Panzeri; Mathew E Diamond
Journal:  Front Synaptic Neurosci       Date:  2010-06-14

4.  A toolbox for the fast information analysis of multiple-site LFP, EEG and spike train recordings.

Authors:  Cesare Magri; Kevin Whittingstall; Vanessa Singh; Nikos K Logothetis; Stefano Panzeri
Journal:  BMC Neurosci       Date:  2009-07-16       Impact factor: 3.288

5.  Random bin for analyzing neuron spike trains.

Authors:  Shinichi Tamura; Tomomitsu Miyoshi; Hajime Sawai; Yuko Mizuno-Matsumoto
Journal:  Comput Intell Neurosci       Date:  2012-07-08
  5 in total

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