Literature DB >> 18523172

Phycicola gilvus gen. nov., sp. nov., an actinobacterium isolated from living seaweed.

Dong Wan Lee1, Jin Mi Lee, Jae Pyo Seo, Peter Schumann, Sae Jae Kim, Soon Dong Lee.   

Abstract

A Gram-positive, aerobic, non-mycelium-forming actinomycete, designated strain SSWW-21(T), was isolated from a living seaweed sample on the coast of Jeju, Republic of Korea. Cells of the organism were rod-shaped or coccoid depending on culture age. Short rods were observed in young cultures, whereas older cultures predominantly consisted of coccoid cells. Rod-shaped cells were motile by means of flagella, but coccoid cells were non-motile. Budding-like cell division was observed. The temperature and pH for growth were 4-30 degrees C and pH 6.1-10.1. Growth occurred in the presence of up to 2 % NaCl. Phylogenetic analyses showed that the organism formed a distinct clade within the family Microbacteriaceae. Comparative 16S rRNA gene sequence analyses showed that strain SSWW-21(T) was related most closely to the type strains of Okibacterium fritillariae (96.8 % similarity), Leifsonia poae (96.8 %) and Agreia bicolorata (96.6 %). Levels of 16S rRNA gene sequence similarity between the new isolate and members of other genera within the family Microbacteriaceae were in the range 93.1-96.3 %. The cell-wall peptidoglycan of strain SSWW-21(T) was of the B-type (2,4-diaminobutyric acid as the diagnostic diamino acid). The acyl type of the muramic acid was acetyl. The predominant menaquinone was MK-11. The polar lipid profile contained phosphatidylcholine, phosphatidylglycerol, phosphatidylinositol and diphosphatidylglycerol. Mycolic acids were not present. The major cellular fatty acids were saturated branched-chain components (anteiso-C(15 : 0) and anteiso-C(17 : 0)). The G+C content of the DNA was 69.8 mol%. On the basis of the phenotypic and phylogenetic data presented, strain SSWW-21(T) is considered to represent a novel species of a new genus within the family Microbacteriaceae, for which the name Phycicola gilvus gen. nov., sp. nov. is proposed. The type strain of Phycicola gilvus is SSWW-21(T) (=KCTC 19185(T) =DSM 18319(T)).

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Year:  2008        PMID: 18523172     DOI: 10.1099/ijs.0.65283-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

Review 1.  Korean indigenous bacterial species with valid names belonging to the phylum Actinobacteria.

Authors:  Kyung Sook Bae; Mi Sun Kim; Ji Hee Lee; Joo Won Kang; Dae In Kim; Ji Hee Lee; Chi Nam Seong
Journal:  J Microbiol       Date:  2016-11-26       Impact factor: 3.422

2.  Homoserinimonas aerilata gen. nov., sp. nov., a novel member of the family Microbacteriaceae isolated from an air sample in Korea.

Authors:  Soo-Jin Kim; Yun-Hee Jang; Moriyuki Hamada; Tomohiko Tamura; Jae-Hyung Ahn; Hang-Yeon Weon; Ken-Ichiro Suzuki; Soon-Wo Kwon
Journal:  J Microbiol       Date:  2012-07-21       Impact factor: 3.422

3.  Leifsonia flava sp. nov., a novel actinobacterium isolated from the rhizosphere of Aquilegia viridiflora.

Authors:  Ying Cai; Wen-Zhen Tao; Yu-Jun Ma; Juan Cheng; Meng-Yue Zhang; Yi-Xuan Zhang
Journal:  J Microbiol       Date:  2018-07-25       Impact factor: 3.422

4.  Diaminobutyricibacter tongyongensis gen. nov., sp. nov. and Homoserinibacter gongjuensis gen. nov., sp. nov. belong to the family Microbacteriaceae.

Authors:  Soo-Jin Kim; Jae-Hyung Ahn; Hang-Yeon Weon; Moriyuki Hamada; Ken-ichiro Suzuki; Soon-Wo Kwon
Journal:  J Microbiol       Date:  2014-02-17       Impact factor: 3.422

5.  Exploring the Diversity and Antimicrobial Potential of Marine Actinobacteria from the Comau Fjord in Northern Patagonia, Chile.

Authors:  Agustina Undabarrena; Fabrizio Beltrametti; Fernanda P Claverías; Myriam González; Edward R B Moore; Michael Seeger; Beatriz Cámara
Journal:  Front Microbiol       Date:  2016-07-19       Impact factor: 5.640

6.  Metabolomic Diversity and Identification of Antibacterial Activities of Bacteria Isolated From Marine Sediments in Hawai'i and Puerto Rico.

Authors:  Ruhnaz Kashfi; Charles Kelsey; David Jorgen Gang; Douglas R Call; David R Gang
Journal:  Front Mol Biosci       Date:  2020-02-25
  6 in total

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