Literature DB >> 18517437

Least dissipation cost as a design principle for robustness and function of cellular networks.

Bo Han1, Jin Wang.   

Abstract

From a study of the budding yeast cell cycle, we found that the cellular network evolves to have the least cost for realizing its biological function. We quantify the cost in terms of the dissipation or heat loss characterized through the steady-state properties: the underlying landscape and the associated flux. We found that the dissipation cost is intimately related to the stability and robustness of the network. With the least dissipation cost, the network becomes most stable and robust under mutations and perturbations on the sharpness of the response from input to output as well as self-degradations. The least dissipation cost may provide a general design principle for the cellular network to survive from the evolution and realize the biological function.

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Year:  2008        PMID: 18517437     DOI: 10.1103/PhysRevE.77.031922

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  5 in total

1.  Stochastic dynamics and non-equilibrium thermodynamics of a bistable chemical system: the Schlögl model revisited.

Authors:  Melissa Vellela; Hong Qian
Journal:  J R Soc Interface       Date:  2008-12-18       Impact factor: 4.118

2.  Potential landscape and flux framework of nonequilibrium networks: robustness, dissipation, and coherence of biochemical oscillations.

Authors:  Jin Wang; Li Xu; Erkang Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-21       Impact factor: 11.205

Review 3.  The chemical master equation approach to nonequilibrium steady-state of open biochemical systems: linear single-molecule enzyme kinetics and nonlinear biochemical reaction networks.

Authors:  Hong Qian; Lisa M Bishop
Journal:  Int J Mol Sci       Date:  2010-09-20       Impact factor: 5.923

4.  Predicting internal cell fluxes at sub-optimal growth.

Authors:  André Schultz; Amina A Qutub
Journal:  BMC Syst Biol       Date:  2015-04-03

5.  Funneled potential and flux landscapes dictate the stabilities of both the states and the flow: Fission yeast cell cycle.

Authors:  Xiaosheng Luo; Liufang Xu; Bo Han; Jin Wang
Journal:  PLoS Comput Biol       Date:  2017-09-11       Impact factor: 4.475

  5 in total

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