Literature DB >> 18515360

Engineering hyperthermostability into a GH11 xylanase is mediated by subtle changes to protein structure.

Claire Dumon1, Alexander Varvak, Mark A Wall, James E Flint, Richard J Lewis, Jeremy H Lakey, Carl Morland, Peter Luginbühl, Shaun Healey, Thomas Todaro, Grace DeSantis, May Sun, Lilian Parra-Gessert, Xuqiu Tan, David P Weiner, Harry J Gilbert.   

Abstract

Understanding the structural basis for protein thermostability is of considerable biological and biotechnological importance as exemplified by the industrial use of xylanases at elevated temperatures in the paper pulp and animal feed sectors. Here we have used directed protein evolution to generate hyperthermostable variants of a thermophilic GH11 xylanase, EvXyn11. The Gene Site Saturation Mutagenesis (GSSM) methodology employed assesses the influence on thermostability of all possible amino acid substitutions at each position in the primary structure of the target protein. The 15 most thermostable mutants, which generally clustered in the N-terminal region of the enzyme, had melting temperatures (Tm) 1-8 degrees C higher than the parent protein. Screening of a combinatorial library of the single mutants identified a hyperthermostable variant, EvXyn11TS, containing seven mutations. EvXyn11TS had a Tm approximately 25 degrees C higher than the parent enzyme while displaying catalytic properties that were similar to EvXyn11. The crystal structures of EvXyn11 and EvXyn11TS revealed an absence of substantial changes to identifiable intramolecular interactions. The only explicable mutations are T13F, which increases hydrophobic interactions, and S9P that apparently locks the conformation of a surface loop. This report shows that the molecular basis for the increased thermostability is extraordinarily subtle and points to the requirement for new tools to interrogate protein folding at non-ambient temperatures.

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Year:  2008        PMID: 18515360     DOI: 10.1074/jbc.M800936200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  28 in total

1.  Terminal amino acids disturb xylanase thermostability and activity.

Authors:  Liangwei Liu; Guoqiang Zhang; Zhang Zhang; Suya Wang; Hongge Chen
Journal:  J Biol Chem       Date:  2011-11-09       Impact factor: 5.157

2.  Enhancing Protein Stability with Genetically Encoded Noncanonical Amino Acids.

Authors:  Jack C Li; Tao Liu; Yan Wang; Angad P Mehta; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2018-11-15       Impact factor: 15.419

3.  Improving the thermostability of a mesophilic family 10 xylanase, AuXyn10A, from Aspergillus usamii by in silico design.

Authors:  Junqing Wang; Zhongbiao Tan; Minchen Wu; Jianfang Li; Jing Wu
Journal:  J Ind Microbiol Biotechnol       Date:  2014-05-31       Impact factor: 3.346

4.  A Single Reactive Noncanonical Amino Acid Is Able to Dramatically Stabilize Protein Structure.

Authors:  Jack C Li; Fariborz Nastertorabi; Weimin Xuan; Gye Won Han; Raymond C Stevens; Peter G Schultz
Journal:  ACS Chem Biol       Date:  2019-06-04       Impact factor: 5.100

5.  Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.

Authors:  Ya-Shan Cheng; Chun-Chi Chen; Chun-Hsiang Huang; Tzu-Ping Ko; Wenhua Luo; Jian-Wen Huang; Je-Ruei Liu; Rey-Ting Guo
Journal:  J Biol Chem       Date:  2014-03-11       Impact factor: 5.157

6.  Improvement in Thermostability of an Achaetomium sp. Strain Xz8 Endopolygalacturonase via the Optimization of Charge-Charge Interactions.

Authors:  Tao Tu; Huiying Luo; Kun Meng; Yanli Cheng; Rui Ma; Pengjun Shi; Huoqing Huang; Yingguo Bai; Yaru Wang; Lujia Zhang; Bin Yao
Journal:  Appl Environ Microbiol       Date:  2015-07-24       Impact factor: 4.792

7.  High-temperature behavior of hyperthermostable Thermotoga maritima xylanase XYN10B after designed and evolved mutations.

Authors:  Yawei Wang; Jing Wang; Zhongqiang Zhang; Jiangke Yang; Ossi Turunen; Hairong Xiong
Journal:  Appl Microbiol Biotechnol       Date:  2022-02-16       Impact factor: 4.813

8.  Detection and characterisation of mutations responsible for allele-specific protein thermostabilities at the Mn-superoxide dismutase gene in the deep-sea hydrothermal vent polychaete Alvinella pompejana.

Authors:  Matthieu Bruneaux; Jean Mary; Marie Verheye; Odile Lecompte; Olivier Poch; Didier Jollivet; Arnaud Tanguy
Journal:  J Mol Evol       Date:  2013-04-23       Impact factor: 2.395

9.  Improvement in thermostability of metagenomic GH11 endoxylanase (Mxyl) by site-directed mutagenesis and its applicability in paper pulp bleaching process.

Authors:  Digvijay Verma T Satyanarayana
Journal:  J Ind Microbiol Biotechnol       Date:  2013-10-08       Impact factor: 3.346

10.  A Comparative Study to Decipher the Structural and Dynamics Determinants Underlying the Activity and Thermal Stability of GH-11 Xylanases.

Authors:  Jelena Vucinic; Gleb Novikov; Cédric Y Montanier; Claire Dumon; Thomas Schiex; Sophie Barbe
Journal:  Int J Mol Sci       Date:  2021-05-31       Impact factor: 5.923

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