Literature DB >> 18514460

Protein and lysate array technologies in cancer research.

Brett Spurrier1, Peter Honkanen, Antonia Holway, Kensuke Kumamoto, Masanori Terashima, Seiichi Takenoshita, Go Wakabayashi, John Austin, Satoshi Nishizuka.   

Abstract

Capturing quantitative proteomic information provides new insights for enhancing the understanding of cancer biology. There have been several protein microarray formats, and each has an advantage depending on what is being detected. However, in contrast to nucleotide printing, the production of protein arrays generally requires the capability of handling viscous solutions, and the mishandling of various factors, such as temperature and humidity, adversely affect protein status. The requirement for such specifications is critical when increasing the throughput for monitoring a large number of samples for rigorous quantitation. In particular, a new solid pin arrayer has been extremely powerful when highly viscous cell lysates printed for high-density, "reverse-phase" protein arrays, and acquired data allows for theoretical models of protein signaling networks to be constructed. In this review, applications of currently available protein microarray technology to cancer research are discussed including the advantages of the new solid pin architecture for opening up powerful proteomic applications.

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Year:  2008        PMID: 18514460     DOI: 10.1016/j.biotechadv.2008.04.002

Source DB:  PubMed          Journal:  Biotechnol Adv        ISSN: 0734-9750            Impact factor:   14.227


  9 in total

Review 1.  Carbon Substrates: A Stable Foundation for Biomolecular Arrays.

Authors:  Matthew R Lockett; Lloyd M Smith
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2015-06-03       Impact factor: 10.745

2.  Evaluation of Protein Profiles From Treated Xenograft Tumor Models Identifies an Antibody Panel for Formalin-fixed and Paraffin-embedded (FFPE) Tissue Analysis by Reverse Phase Protein Arrays (RPPA).

Authors:  Sabine Bader; Magdalena Zajac; Thomas Friess; Elisabeth Ruge; Natascha Rieder; Berthold Gierke; Yvonne Heubach; Marlene Thomas; Michael Pawlak
Journal:  Mol Cell Proteomics       Date:  2015-06-23       Impact factor: 5.911

3.  Discovery of peptidylarginine deiminase-4 substrates by protein array: antagonistic citrullination and methylation of human ribosomal protein S2.

Authors:  Qin Guo; Mark T Bedford; Walter Fast
Journal:  Mol Biosyst       Date:  2011-05-16

Review 4.  Antibody-based protein multiplex platforms: technical and operational challenges.

Authors:  Allison A Ellington; Iftikhar J Kullo; Kent R Bailey; George G Klee
Journal:  Clin Chem       Date:  2009-12-03       Impact factor: 8.327

Review 5.  DNA repair phenotype and cancer susceptibility--a mini review.

Authors:  Chunying Li; Li-E Wang; Qingyi Wei
Journal:  Int J Cancer       Date:  2009-03-01       Impact factor: 7.396

6.  Networks inferred from biochemical data reveal profound differences in toll-like receptor and inflammatory signaling between normal and transformed hepatocytes.

Authors:  Leonidas G Alexopoulos; Julio Saez-Rodriguez; Benjamin D Cosgrove; Douglas A Lauffenburger; Peter K Sorger
Journal:  Mol Cell Proteomics       Date:  2010-05-10       Impact factor: 5.911

7.  Spatiotemporal expression profiling of proteins in rat sciatic nerve regeneration using reverse phase protein arrays.

Authors:  David J Bryan; C Robert Litchfield; Jeffrey V Manchio; Tanya Logvinenko; Antonia H Holway; John Austin; Ian C Summerhayes; Kimberly M Rieger-Christ
Journal:  Proteome Sci       Date:  2012-02-10       Impact factor: 2.480

8.  An efficient procedure for protein extraction from formalin-fixed, paraffin-embedded tissues for reverse phase protein arrays.

Authors:  Yiling Lu; Bryan T Hennessy; Dimitra Tsavachidou; Huifang Guo; Wenbin Liu; Zhenlin Ju; Pheroze Tamboli; Eric Jonasch; Gordon B Mills
Journal:  Proteome Sci       Date:  2012-09-24       Impact factor: 2.480

Review 9.  Applications of protein biochips in biomedical and biotechnological research.

Authors:  Dirk Weinrich; Pascal Jonkheijm; Christof M Niemeyer; Herbert Waldmann
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

  9 in total

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