Literature DB >> 18511339

Characterization of temperate phage Che12 and construction of a new tool for diagnosis of tuberculosis.

Vanaja Kumar1, Prabakaran Loganathan, Gomathi Sivaramakrishnan, Jordan Kriakov, Azger Dusthakeer, Balaji Subramanyam, John Chan, William R Jacobs, Narayanan Paranji Rama.   

Abstract

A temperate phage, Che12, able to infect Mycobacterium tuberculosis, was isolated from soil samples taken from tuberculosis sanatorium area in Chennai, India. The plaque morphology of this phage showed varying grades of turbidity on lawns of M. tuberculosis. The temperate nature of Che12 was established by super infection immunity. Phage integration into the host genomic DNA was confirmed by Southern hybridization using Che12 DNA as a probe. PCR amplification and sequencing of a part of the integrated phage genome in a M. tuberculosis lysogen also confirmed the temperate nature of Che12. The morphology of the phage particles was observed by electron microscopy, revealing similarities to other mycobacteriophages like L5, D29 and TM4. A luciferase reporter phage, phAETRC16, was constructed by cloning firefly luciferase gene into Che12. Infection of viable M. tuberculosis cells by phAETRC16 resulted in expression of luciferase leading to sustained light output. Che12, a true temperate phage infecting M. tuberculosis, is thus ideally suited for developing a diagnostic tool facilitating rapid diagnosis of M. tuberculosis.

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Year:  2008        PMID: 18511339      PMCID: PMC2678029          DOI: 10.1016/j.tube.2008.02.007

Source DB:  PubMed          Journal:  Tuberculosis (Edinb)        ISSN: 1472-9792            Impact factor:   3.131


  24 in total

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Journal:  Comput Biol Chem       Date:  2007-02-20       Impact factor: 2.877

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8.  Isolation and characterization of Micromonospora phage PhiHAU8 and development into a phasmid.

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Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

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  11 in total

1.  Homology modeling, substrate docking, and molecular simulation studies of mycobacteriophage Che12 lysin A.

Authors:  Shainaba A Saadhali; Sameer Hassan; Luke Elizabeth Hanna; Uma Devi Ranganathan; Vanaja Kumar
Journal:  J Mol Model       Date:  2016-07-13       Impact factor: 1.810

2.  Genomic and proteomic features of mycobacteriophage SWU1 isolated from China soil.

Authors:  Xiangyu Fan; Jianlong Yan; Longxiang Xie; Lanying Zeng; Ryland F Young; Jianping Xie
Journal:  Gene       Date:  2015-02-19       Impact factor: 3.688

3.  Biology of a novel mycobacteriophage, SWU1, isolated from Chinese soil as revealed by genomic characteristics.

Authors:  Xiangyu Fan; Tieshan Teng; Honghai Wang; Jianping Xie
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Journal:  Microbiology (Reading)       Date:  2009-06-25       Impact factor: 2.777

5.  Phage-based platforms for the clinical detection of human bacterial pathogens.

Authors:  David A Schofield; Natasha J Sharp; Caroline Westwater
Journal:  Bacteriophage       Date:  2012-04-01

6.  Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution.

Authors:  Welkin H Pope; Deborah Jacobs-Sera; Daniel A Russell; Craig L Peebles; Zein Al-Atrache; Turi A Alcoser; Lisa M Alexander; Matthew B Alfano; Samantha T Alford; Nichols E Amy; Marie D Anderson; Alexander G Anderson; Andrew A S Ang; Manuel Ares; Amanda J Barber; Lucia P Barker; Jonathan M Barrett; William D Barshop; Cynthia M Bauerle; Ian M Bayles; Katherine L Belfield; Aaron A Best; Agustin Borjon; Charles A Bowman; Christine A Boyer; Kevin W Bradley; Victoria A Bradley; Lauren N Broadway; Keshav Budwal; Kayla N Busby; Ian W Campbell; Anne M Campbell; Alyssa Carey; Steven M Caruso; Rebekah D Chew; Chelsea L Cockburn; Lianne B Cohen; Jeffrey M Corajod; Steven G Cresawn; Kimberly R Davis; Lisa Deng; Dee R Denver; Breyon R Dixon; Sahrish Ekram; Sarah C R Elgin; Angela E Engelsen; Belle E V English; Marcella L Erb; Crystal Estrada; Laura Z Filliger; Ann M Findley; Lauren Forbes; Mark H Forsyth; Tyler M Fox; Melissa J Fritz; Roberto Garcia; Zindzi D George; Anne E Georges; Christopher R Gissendanner; Shannon Goff; Rebecca Goldstein; Kobie C Gordon; Russell D Green; Stephanie L Guerra; Krysta R Guiney-Olsen; Bridget G Guiza; Leila Haghighat; Garrett V Hagopian; Catherine J Harmon; Jeremy S Harmson; Grant A Hartzog; Samuel E Harvey; Siping He; Kevin J He; Kaitlin E Healy; Ellen R Higinbotham; Erin N Hildebrandt; Jason H Ho; Gina M Hogan; Victoria G Hohenstein; Nathan A Holz; Vincent J Huang; Ericka L Hufford; Peter M Hynes; Arrykka S Jackson; Erica C Jansen; Jonathan Jarvik; Paul G Jasinto; Tuajuanda C Jordan; Tomas Kasza; Murray A Katelyn; Jessica S Kelsey; Larisa A Kerrigan; Daryl Khaw; Junghee Kim; Justin Z Knutter; Ching-Chung Ko; Gail V Larkin; Jennifer R Laroche; Asma Latif; Kohana D Leuba; Sequoia I Leuba; Lynn O Lewis; Kathryn E Loesser-Casey; Courtney A Long; A Javier Lopez; Nicholas Lowery; Tina Q Lu; Victor Mac; Isaac R Masters; Jazmyn J McCloud; Molly J McDonough; Andrew J Medenbach; Anjali Menon; Rachel Miller; Brandon K Morgan; Patrick C Ng; Elvis Nguyen; Katrina T Nguyen; Emilie T Nguyen; Kaylee M Nicholson; Lindsay A Parnell; Caitlin E Peirce; Allison M Perz; Luke J Peterson; Rachel E Pferdehirt; Seegren V Philip; Kit Pogliano; Joe Pogliano; Tamsen Polley; Erica J Puopolo; Hannah S Rabinowitz; Michael J Resiss; Corwin N Rhyan; Yetta M Robinson; Lauren L Rodriguez; Andrew C Rose; Jeffrey D Rubin; Jessica A Ruby; Margaret S Saha; James W Sandoz; Judith Savitskaya; Dale J Schipper; Christine E Schnitzler; Amanda R Schott; J Bradley Segal; Christopher D Shaffer; Kathryn E Sheldon; Erica M Shepard; Jonathan W Shepardson; Madav K Shroff; Jessica M Simmons; Erika F Simms; Brandy M Simpson; Kathryn M Sinclair; Robert L Sjoholm; Ingrid J Slette; Blaire C Spaulding; Clark L Straub; Joseph Stukey; Trevor Sughrue; Tin-Yun Tang; Lyons M Tatyana; Stephen B Taylor; Barbara J Taylor; Louise M Temple; Jasper V Thompson; Michael P Tokarz; Stephanie E Trapani; Alexander P Troum; Jonathan Tsay; Anthony T Tubbs; Jillian M Walton; Danielle H Wang; Hannah Wang; John R Warner; Emilie G Weisser; Samantha C Wendler; Kathleen A Weston-Hafer; Hilary M Whelan; Kurt E Williamson; Angelica N Willis; Hannah S Wirtshafter; Theresa W Wong; Phillip Wu; Yun jeong Yang; Brandon C Yee; David A Zaidins; Bo Zhang; Melina Y Zúniga; Roger W Hendrix; Graham F Hatfull
Journal:  PLoS One       Date:  2011-01-27       Impact factor: 3.240

7.  A second endolysin gene is fully embedded in-frame with the lysA gene of mycobacteriophage Ms6.

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8.  SGP-C: A Broad Host Range Temperate Bacteriophage; Against Salmonella gallinarum.

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Authors:  Mariana Piuri; William R Jacobs; Graham F Hatfull
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10.  A Syringe-Based Biosensor to Rapidly Detect Low Levels of Escherichia Coli (ECOR13) in Drinking Water Using Engineered Bacteriophages.

Authors:  Troy C Hinkley; Spencer Garing; Paras Jain; John Williford; Anne-Laure M Le Ny; Kevin P Nichols; Joseph E Peters; Joey N Talbert; Sam R Nugen
Journal:  Sensors (Basel)       Date:  2020-03-31       Impact factor: 3.576

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