Literature DB >> 1851122

Synthetic oligonucleotides recreate Drosophila fushi tarazu zebra-stripe expression.

J Topol1, C R Dearolf, K Prakash, C S Parker.   

Abstract

A complex array of activator and repressor elements located within 669 bp proximal to the fushi tarazu (ftz) transcriptional start site is sufficient to generate the "zebra-stripe" expression pattern characteristic of the ftz gene. P-element-mediated transformation and ftz promoter/lacZ fusion genes were used to characterize, in detail, several of these transcriptional control elements. By reconstructing promoters with synthetic oligonucleotides containing cis-regulators of stripe expression, we show that these regulatory sites can function as independent units to direct position-specific transcription in the Drosophila embryo. In particular, we demonstrate that multiple copies of a positive regulatory site can mediate expression in both the odd- and even-numbered parasegments throughout most of the germ band and that negative regulatory sites can transform a continuous pattern of gene expression into discrete stripes. The reconstructed promoter system presented provides an effective means of studying molecular mechanisms governing spatially restricted transcription in the early embryo.

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Year:  1991        PMID: 1851122     DOI: 10.1101/gad.5.5.855

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  23 in total

1.  Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome.

Authors:  Benjamin P Berman; Yutaka Nibu; Barret D Pfeiffer; Pavel Tomancak; Susan E Celniker; Michael Levine; Gerald M Rubin; Michael B Eisen
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

Review 2.  Dynamics of potentiation and activation: GAGA factor and its role in heat shock gene regulation.

Authors:  R C Wilkins; J T Lis
Journal:  Nucleic Acids Res       Date:  1997-10-15       Impact factor: 16.971

3.  Complexity of sea urchin embryo nuclear proteins that contain basic domains.

Authors:  M G Harrington; J A Coffman; F J Calzone; L E Hood; R J Britten; E H Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-15       Impact factor: 11.205

4.  Multiprotein bridging factor 1 (MBF1) is an evolutionarily conserved transcriptional coactivator that connects a regulatory factor and TATA element-binding protein.

Authors:  K i Takemaru; F Q Li; H Ueda; S Hirose
Journal:  Proc Natl Acad Sci U S A       Date:  1997-07-08       Impact factor: 11.205

Review 5.  Modular cis-regulatory organization of developmentally expressed genes: two genes transcribed territorially in the sea urchin embryo, and additional examples.

Authors:  C V Kirchhamer; C H Yuh; E H Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-03       Impact factor: 11.205

6.  Co-operative DNA binding by GAGA transcription factor requires the conserved BTB/POZ domain and reorganizes promoter topology.

Authors:  K R Katsani; M A Hajibagheri; C P Verrijzer
Journal:  EMBO J       Date:  1999-02-01       Impact factor: 11.598

7.  Sex combs reduced (Scr) regulatory region of Drosophila revisited.

Authors:  Juan M Calvo-Martín; Montserrat Papaceit; Carmen Segarra
Journal:  Mol Genet Genomics       Date:  2017-03-22       Impact factor: 3.291

8.  Chromatin remodeling mediated by Drosophila GAGA factor and ISWI activates fushi tarazu gene transcription in vitro.

Authors:  M Okada; S Hirose
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

9.  Dosage-sensitive maternal modifiers of the drosophila segmentation gene runt.

Authors:  J B Duffy; J Wells; J P Gergen
Journal:  Genetics       Date:  1996-03       Impact factor: 4.562

10.  The Drosophila nuclear receptors FTZ-F1 alpha and FTZ-F1 beta compete as monomers for binding to a site in the fushi tarazu gene.

Authors:  C K Ohno; H Ueda; M Petkovich
Journal:  Mol Cell Biol       Date:  1994-05       Impact factor: 4.272

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