Literature DB >> 18508552

The role of programmed-1 ribosomal frameshifting in coronavirus propagation.

Ewan P Plant1, Jonathan D Dinman.   

Abstract

Coronaviruses have the potential to cause significant economic, agricultural and health problems. The severe acute respiratory syndrome (SARS) associated coronavirus outbreak in late 2002, early 2003 called attention to the potential damage that coronaviruses could cause in the human population. The ensuing research has enlightened many to the molecular biology of coronaviruses. A programmed -1 ribosomal frameshift is required by coronaviruses for the production of the RNA dependent RNA polymerase which in turn is essential for viral replication. The frameshifting signal encoded in the viral genome has additional features that are not essential for frameshifting. Elucidation of the differences between coronavirus frameshift signals and signals from other viruses may help our understanding of these features. Here we summarize current knowledge and add additional insight regarding the function of the programmed -1 ribosomal frameshift signal in the coronavirus lifecycle.

Entities:  

Mesh:

Year:  2008        PMID: 18508552      PMCID: PMC2435135          DOI: 10.2741/3046

Source DB:  PubMed          Journal:  Front Biosci        ISSN: 1093-4715


  48 in total

Review 1.  The molecular biology of coronaviruses.

Authors:  Paul S Masters
Journal:  Adv Virus Res       Date:  2006       Impact factor: 9.937

2.  trans regulation of cap-independent translation by a viral subgenomic RNA.

Authors:  Ruizhong Shen; Aurélie M Rakotondrafara; W Allen Miller
Journal:  J Virol       Date:  2006-10       Impact factor: 5.103

3.  Comparative study of the effects of heptameric slippery site composition on -1 frameshifting among different eukaryotic systems.

Authors:  Ewan P Plant; Jonathan D Dinman
Journal:  RNA       Date:  2006-02-22       Impact factor: 4.942

4.  Ultrastructure and origin of membrane vesicles associated with the severe acute respiratory syndrome coronavirus replication complex.

Authors:  Eric J Snijder; Yvonne van der Meer; Jessika Zevenhoven-Dobbe; Jos J M Onderwater; Jannes van der Meulen; Henk K Koerten; A Mieke Mommaas
Journal:  J Virol       Date:  2006-06       Impact factor: 5.103

Review 5.  Coronavirus pathogenesis and the emerging pathogen severe acute respiratory syndrome coronavirus.

Authors:  Susan R Weiss; Sonia Navas-Martin
Journal:  Microbiol Mol Biol Rev       Date:  2005-12       Impact factor: 11.056

6.  Evolutionary insights into the ecology of coronaviruses.

Authors:  D Vijaykrishna; G J D Smith; J X Zhang; J S M Peiris; H Chen; Y Guan
Journal:  J Virol       Date:  2007-01-31       Impact factor: 5.103

7.  A three-stemmed mRNA pseudoknot in the SARS coronavirus frameshift signal.

Authors:  Ewan P Plant; Gabriela C Pérez-Alvarado; Jonathan L Jacobs; Bani Mukhopadhyay; Mirko Hennig; Jonathan D Dinman
Journal:  PLoS Biol       Date:  2005-05-17       Impact factor: 8.029

Review 8.  Hosting the severe acute respiratory syndrome coronavirus: specific cell factors required for infection.

Authors:  Cornelis A M de Haan; Peter J M Rottier
Journal:  Cell Microbiol       Date:  2006-06-27       Impact factor: 3.715

9.  pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows.

Authors:  Jens Reeder; Peter Steffen; Robert Giegerich
Journal:  Nucleic Acids Res       Date:  2007-05-03       Impact factor: 16.971

10.  The three transfer RNAs occupying the A, P and E sites on the ribosome are involved in viral programmed -1 ribosomal frameshift.

Authors:  Mélissa Léger; Dominic Dulude; Sergey V Steinberg; Léa Brakier-Gingras
Journal:  Nucleic Acids Res       Date:  2007-08-17       Impact factor: 16.971

View more
  36 in total

1.  Achieving a golden mean: mechanisms by which coronaviruses ensure synthesis of the correct stoichiometric ratios of viral proteins.

Authors:  Ewan P Plant; Rasa Rakauskaite; Deborah R Taylor; Jonathan D Dinman
Journal:  J Virol       Date:  2010-02-17       Impact factor: 5.103

2.  Triplex structures in an RNA pseudoknot enhance mechanical stability and increase efficiency of -1 ribosomal frameshifting.

Authors:  Gang Chen; Kung-Yao Chang; Ming-Yuan Chou; Carlos Bustamante; Ignacio Tinoco
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-23       Impact factor: 11.205

3.  Ablation of Programmed -1 Ribosomal Frameshifting in Venezuelan Equine Encephalitis Virus Results in Attenuated Neuropathogenicity.

Authors:  Joseph A Kendra; Cynthia de la Fuente; Ashwini Brahms; Caitlin Woodson; Todd M Bell; Bin Chen; Yousuf A Khan; Jonathan L Jacobs; Kylene Kehn-Hall; Jonathan D Dinman
Journal:  J Virol       Date:  2017-01-18       Impact factor: 5.103

Review 4.  Regulators of Viral Frameshifting: More Than RNA Influences Translation Events.

Authors:  Wesley D Penn; Haley R Harrington; Jonathan P Schlebach; Suchetana Mukhopadhyay
Journal:  Annu Rev Virol       Date:  2020-06-29       Impact factor: 10.431

5.  The Translational Landscape of SARS-CoV-2-infected Cells Reveals Suppression of Innate Immune Genes.

Authors:  Maritza Puray-Chavez; Nakyung Lee; Kasyap Tenneti; Yiqing Wang; Hung R Vuong; Yating Liu; Amjad Horani; Tao Huang; Sean P Gunsten; James B Case; Wei Yang; Michael S Diamond; Steven L Brody; Joseph Dougherty; Sebla B Kutluay
Journal:  mBio       Date:  2022-05-23       Impact factor: 7.786

Review 6.  Continuous and Discontinuous RNA Synthesis in Coronaviruses.

Authors:  Isabel Sola; Fernando Almazán; Sonia Zúñiga; Luis Enjuanes
Journal:  Annu Rev Virol       Date:  2015-11       Impact factor: 10.431

7.  The many paths to frameshifting: kinetic modelling and analysis of the effects of different elongation steps on programmed -1 ribosomal frameshifting.

Authors:  Pei-Yu Liao; Yong Seok Choi; Jonathan D Dinman; Kelvin H Lee
Journal:  Nucleic Acids Res       Date:  2010-09-07       Impact factor: 16.971

8.  Binding of the 5'-untranslated region of coronavirus RNA to zinc finger CCHC-type and RNA-binding motif 1 enhances viral replication and transcription.

Authors:  Yong Wah Tan; Wanjin Hong; Ding Xiang Liu
Journal:  Nucleic Acids Res       Date:  2012-02-22       Impact factor: 16.971

9.  Recode-2: new design, new search tools, and many more genes.

Authors:  Michaël Bekaert; Andrew E Firth; Yan Zhang; Vadim N Gladyshev; John F Atkins; Pavel V Baranov
Journal:  Nucleic Acids Res       Date:  2009-09-25       Impact factor: 16.971

Review 10.  Possible Targets of Pan-Coronavirus Antiviral Strategies for Emerging or Re-Emerging Coronaviruses.

Authors:  Xue Li; Liying Zhang; Si Chen; Hongsheng Ouyang; Linzhu Ren
Journal:  Microorganisms       Date:  2021-07-10
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.