Literature DB >> 18507382

Enantiomer-specific binding of ruthenium(II) molecular wires by the amine oxidase of Arthrobacter globiformis.

David B Langley1, Doreen E Brown, Lionel E Cheruzel, Stephen M Contakes, Anthony P Duff, Kimberly M Hilmer, David M Dooley, Harry B Gray, J Mitchell Guss, Hans C Freeman.   

Abstract

The copper amine oxidase from Arthrobacter globiformis (AGAO) is reversibly inhibited by molecular wires comprising a Ru(II) complex head group and an aromatic tail group joined by an alkane linker. The crystal structures of a series of Ru(II)-wire-AGAO complexes differing with respect to the length of the alkane linker have been determined. All wires lie in the AGAO active-site channel, with their aromatic tail group in contact with the trihydroxyphenylalanine quinone (TPQ) cofactor of the enzyme. The TPQ cofactor is consistently in its active ("off-Cu") conformation, and the side chain of the so-called "gate" residue Tyr296 is consistently in the "gate-open" conformation. Among the wires tested, the most stable complex is produced when the wire has a -(CH2)4- linker. In this complex, the Ru(II)(phen)(bpy)2 head group is level with the protein molecular surface. Crystal structures of AGAO in complex with optically pure forms of the C4 wire show that the linker and head group in the two enantiomers occupy slightly different positions in the active-site channel. Both the Lambda and Delta isomers are effective competitive inhibitors of amine oxidation. Remarkably, inhibition by the C4 wire shows a high degree of selectivity for AGAO in comparison with other copper-containing amine oxidases.

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Year:  2008        PMID: 18507382      PMCID: PMC2518534          DOI: 10.1021/ja801289f

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes.

Authors:  Ian W Davis; Laura Weston Murray; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

2.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

3.  Crystal structure of amine oxidase from bovine serum.

Authors:  Michele Lunelli; Maria Luisa Di Paolo; Marianna Biadene; Vito Calderone; Roberto Battistutta; Marina Scarpa; Adelio Rigo; Giuseppe Zanotti
Journal:  J Mol Biol       Date:  2005-01-25       Impact factor: 5.469

4.  PRODRG, a program for generating molecular topologies and unique molecular descriptors from coordinates of small molecules.

Authors:  D M van Aalten; R Bywater; J B Findlay; M Hendlich; R W Hooft; G Vriend
Journal:  J Comput Aided Mol Des       Date:  1996-06       Impact factor: 3.686

5.  The 1.23 Angstrom structure of Pichia pastoris lysyl oxidase reveals a lysine-lysine cross-link.

Authors:  Anthony P Duff; Aina E Cohen; Paul J Ellis; Kim Hilmer; David B Langley; David M Dooley; Hans C Freeman; J Mitchell Guss
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-08-19

6.  Catalytic turnover of substrate benzylamines by the quinone-dependent plasma amine oxidase leads to H2O2-dependent inactivation: evidence for generation of a cofactor-derived benzoxazole.

Authors:  Y Lee; E Shepard; J Smith; D M Dooley; L M Sayre
Journal:  Biochemistry       Date:  2001-01-23       Impact factor: 3.162

7.  The copper-containing amine oxidase from Arthrobacter globiformis: refinement at 1.55 and 2.20 A resolution in two crystal forms.

Authors:  David B Langley; Anthony P Duff; Hans C Freeman; J Mitchell Guss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-10-25

8.  The action of plasma amine oxidase on beta-haloamines. Evidence for proton abstraction in the oxidative reaction.

Authors:  R Neumann; R Hevey; R H Abeles
Journal:  J Biol Chem       Date:  1975-08-25       Impact factor: 5.157

9.  Gold electrodes wired for coupling with the deeply buried active site of Arthrobacter globiformis amine oxidase.

Authors:  Corinna R Hess; Gregory A Juda; David M Dooley; Ricky N Amii; Michael G Hill; Jay R Winkler; Harry B Gray
Journal:  J Am Chem Soc       Date:  2003-06-18       Impact factor: 15.419

10.  Active site rearrangement of the 2-hydrazinopyridine adduct in Escherichia coli amine oxidase to an azo copper(II) chelate form: a key role for tyrosine 369 in controlling the mobility of the TPQ-2HP adduct.

Authors:  Minae Mure; Christian R Kurtis; Doreen E Brown; Melanie S Rogers; Winston S Tambyrajah; Colin Saysell; Carrie M Wilmot; Simon E V Phillips; Peter F Knowles; David M Dooley; Michael J McPherson
Journal:  Biochemistry       Date:  2005-02-08       Impact factor: 3.162

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  5 in total

1.  Probing the heme-thiolate oxygenase domain of inducible nitric oxide synthase with Ru(II) and Re(I) electron tunneling wires.

Authors:  Charlotte A Whited; Wendy Belliston-Bittner; Alexander R Dunn; Jay R Winkler; Harry B Gray
Journal:  J Porphyr Phthalocyanines       Date:  2008-09-01       Impact factor: 1.811

Review 2.  Copper active sites in biology.

Authors:  Edward I Solomon; David E Heppner; Esther M Johnston; Jake W Ginsbach; Jordi Cirera; Munzarin Qayyum; Matthew T Kieber-Emmons; Christian H Kjaergaard; Ryan G Hadt; Li Tian
Journal:  Chem Rev       Date:  2014-03-03       Impact factor: 60.622

Review 3.  Ru(II)-diimine functionalized metalloproteins: From electron transfer studies to light-driven biocatalysis.

Authors:  Quan Lam; Mallory Kato; Lionel Cheruzel
Journal:  Biochim Biophys Acta       Date:  2015-09-25

4.  A new crystal form of human diamine oxidase.

Authors:  Aaron P McGrath; Kimberly M Hilmer; Charles A Collyer; David M Dooley; J Mitchell Guss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-01-27

5.  Structure and inhibition of human diamine oxidase.

Authors:  Aaron P McGrath; Kimberly M Hilmer; Charles A Collyer; Eric M Shepard; Bradley O Elmore; Doreen E Brown; David M Dooley; J Mitchell Guss
Journal:  Biochemistry       Date:  2009-10-20       Impact factor: 3.162

  5 in total

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