Literature DB >> 18503243

[Evaluation of gene index for identification of Byssochlamys spp].

Maiko Watanabe1, Yuko Kato, Keiko Togami, Mikiko Yamanaka, Keiko Wakabayashi, Hiroyuki Ogawa, Yuko Wasada, Keiichi Goto, Yukiko Hara-Kudo, Norihide Amano, Akira Yokota.   

Abstract

Comparative sequence analysis was performed on the 18S rRNA gene (1,676 bp), 26/28S rRNA gene D2 region (321 bp) and lys2 (997 bp) to evaluate the gene index for rapid, accurate and convenient identification of Byssochlamys spp. and related species. The results showed that 26 strains (11 species) of the clade could be identified or grouped by means of each gene sequence. The highest resolution to discriminate these species was observed with lys2, but 26/28S rRNA gene D2 region was considered to be the best index for convenient identification. In addition, phylogenetic analysis based on these genes indicated that genus Byssochlamys is not monophyletic, although species in the clade are closely related to each other. Re-classification will be necessary, based on detailed morphological observations.

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Year:  2008        PMID: 18503243     DOI: 10.3358/shokueishi.49.82

Source DB:  PubMed          Journal:  Shokuhin Eiseigaku Zasshi        ISSN: 0015-6426            Impact factor:   0.464


  1 in total

1.  Molecular phylogeny of the higher and lower taxonomy of the Fusarium genus and differences in the evolutionary histories of multiple genes.

Authors:  Maiko Watanabe; Takahiro Yonezawa; Ken-ichi Lee; Susumu Kumagai; Yoshiko Sugita-Konishi; Keiichi Goto; Yukiko Hara-Kudo
Journal:  BMC Evol Biol       Date:  2011-11-03       Impact factor: 3.260

  1 in total

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