Literature DB >> 18502867

Hydroquinone dioxygenase from pseudomonas fluorescens ACB: a novel member of the family of nonheme-iron(II)-dependent dioxygenases.

Mariëlle J H Moonen1, Silvia A Synowsky, Willy A M van den Berg, Adrie H Westphal, Albert J R Heck, Robert H H van den Heuvel, Marco W Fraaije, Willem J H van Berkel.   

Abstract

Hydroquinone 1,2-dioxygenase (HQDO), an enzyme involved in the catabolism of 4-hydroxyacetophenone in Pseudomonas fluorescens ACB, was purified to apparent homogeneity. Ligandation with 4-hydroxybenzoate prevented the enzyme from irreversible inactivation. HQDO was activated by iron(II) ions and catalyzed the ring fission of a wide range of hydroquinones to the corresponding 4-hydroxymuconic semialdehydes. HQDO was inactivated by 2,2'-dipyridyl, o-phenanthroline, and hydrogen peroxide and inhibited by phenolic compounds. The inhibition with 4-hydroxybenzoate (K(i) = 14 microM) was competitive with hydroquinone. Online size-exclusion chromatography-mass spectrometry revealed that HQDO is an alpha2beta2 heterotetramer of 112.4 kDa, which is composed of an alpha-subunit of 17.8 kDa and a beta-subunit of 38.3 kDa. Each beta-subunit binds one molecule of 4-hydroxybenzoate and one iron(II) ion. N-terminal sequencing and peptide mapping and sequencing based on matrix-assisted laser desorption ionization--two-stage time of flight analysis established that the HQDO subunits are encoded by neighboring open reading frames (hapC and hapD) of a gene cluster, implicated to be involved in 4-hydroxyacetophenone degradation. HQDO is a novel member of the family of nonheme-iron(II)-dependent dioxygenases. The enzyme shows insignificant sequence identity with known dioxygenases.

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Year:  2008        PMID: 18502867      PMCID: PMC2493252          DOI: 10.1128/JB.01945-07

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  72 in total

1.  The effect of the source pressure on the abundance of ions of noncovalent protein assemblies in an electrospray ionization orthogonal time-of-flight instrument.

Authors:  N Tahallah; M Pinkse; C S Maier; A J Heck
Journal:  Rapid Commun Mass Spectrom       Date:  2001       Impact factor: 2.419

2.  In-gel digestion of proteins for internal sequence analysis after one- or two-dimensional gel electrophoresis.

Authors:  J Rosenfeld; J Capdevielle; J C Guillemot; P Ferrara
Journal:  Anal Biochem       Date:  1992-05-15       Impact factor: 3.365

3.  Purification of hydroxyquinol 1,2-dioxygenase and maleylacetate reductase: the lower pathway of 2,4,5-trichlorophenoxyacetic acid metabolism by Burkholderia cepacia AC1100.

Authors:  D L Daubaras; K Saido; A M Chakrabarty
Journal:  Appl Environ Microbiol       Date:  1996-11       Impact factor: 4.792

4.  2-aminophenol 1,6-dioxygenase: a novel aromatic ring cleavage enzyme purified from Pseudomonas pseudoalcaligenes JS45.

Authors:  U Lendenmann; J C Spain
Journal:  J Bacteriol       Date:  1996-11       Impact factor: 3.490

5.  PcpA, which is involved in the degradation of pentachlorophenol in Sphingomonas chlorophenolica ATCC39723, is a novel type of ring-cleavage dioxygenase.

Authors:  Y Ohtsubo; K Miyauchi; K Kanda; T Hatta; H Kiyohara; T Senda; Y Nagata; Y Mitsui; M Takagi
Journal:  FEBS Lett       Date:  1999-10-15       Impact factor: 4.124

6.  Organization and regulation of pentachlorophenol-degrading genes in Sphingobium chlorophenolicum ATCC 39723.

Authors:  Mian Cai; Luying Xun
Journal:  J Bacteriol       Date:  2002-09       Impact factor: 3.490

7.  Crystal structures of the reaction intermediate and its homologue of an extradiol-cleaving catecholic dioxygenase.

Authors:  Nobuyuki Sato; Yoshitaka Uragami; Tomoko Nishizaki; Yoshito Takahashi; Gen Sazaki; Keisuke Sugimoto; Takamasa Nonaka; Eiji Masai; Masao Fukuda; Toshiya Senda
Journal:  J Mol Biol       Date:  2002-08-23       Impact factor: 5.469

8.  Microbial degradation of chlorinated acetophenones.

Authors:  J Havel; W Reineke
Journal:  Appl Environ Microbiol       Date:  1993-08       Impact factor: 4.792

9.  Substitution of Arg214 at the substrate-binding site of p-hydroxybenzoate hydroxylase from Pseudomonas fluorescens.

Authors:  W van Berkel; A Westphal; K Eschrich; M Eppink; A de Kok
Journal:  Eur J Biochem       Date:  1992-12-01

10.  EPR and Mössbauer studies of protocatechuate 4,5-dioxygenase. Characterization of a new Fe2+ environment.

Authors:  D M Arciero; J D Lipscomb; B H Huynh; T A Kent; E Münck
Journal:  J Biol Chem       Date:  1983-12-25       Impact factor: 5.157

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  23 in total

1.  Characterization of MnpC, a hydroquinone dioxygenase likely involved in the meta-nitrophenol degradation by Cupriavidus necator JMP134.

Authors:  Ying Yin; Ning-Yi Zhou
Journal:  Curr Microbiol       Date:  2010-04-13       Impact factor: 2.188

2.  Determination of the active site of Sphingobium chlorophenolicum 2,6-dichlorohydroquinone dioxygenase (PcpA).

Authors:  Timothy E Machonkin; Patrick L Holland; Kristine N Smith; Justin S Liberman; Adriana Dinescu; Thomas R Cundari; Sara S Rocks
Journal:  J Biol Inorg Chem       Date:  2010-03       Impact factor: 3.358

3.  Functional Metagenomics of a Biostimulated Petroleum-Contaminated Soil Reveals an Extraordinary Diversity of Extradiol Dioxygenases.

Authors:  Laura Terrón-González; Guadalupe Martín-Cabello; Manuel Ferrer; Eduardo Santero
Journal:  Appl Environ Microbiol       Date:  2016-04-04       Impact factor: 4.792

4.  Analysis of two gene clusters involved in the degradation of 4-fluorophenol by Arthrobacter sp. strain IF1.

Authors:  Maria Isabel M Ferreira; Toshiya Iida; Syed A Hasan; Kaoru Nakamura; Marco W Fraaije; Dick B Janssen; Toshiaki Kudo
Journal:  Appl Environ Microbiol       Date:  2009-10-16       Impact factor: 4.792

5.  Identification and characterization of catabolic para-nitrophenol 4-monooxygenase and para-benzoquinone reductase from Pseudomonas sp. strain WBC-3.

Authors:  Jun-Jie Zhang; Hong Liu; Yi Xiao; Xian-En Zhang; Ning-Yi Zhou
Journal:  J Bacteriol       Date:  2009-02-13       Impact factor: 3.490

6.  Induction of aromatic ring: cleavage dioxygenases in Stenotrophomonas maltophilia strain KB2 in cometabolic systems.

Authors:  Danuta Wojcieszyńska; Urszula Guzik; Izabela Greń; Magdalena Perkosz; Katarzyna Hupert-Kocurek
Journal:  World J Microbiol Biotechnol       Date:  2010-08-10       Impact factor: 3.312

7.  Structural characterization of 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA) from Sphingobium chlorophenolicum, a new type of aromatic ring-cleavage enzyme.

Authors:  Robert P Hayes; Abigail R Green; Mark S Nissen; Kevin M Lewis; Luying Xun; Chulhee Kang
Journal:  Mol Microbiol       Date:  2013-03-26       Impact factor: 3.501

8.  The gene cluster for para-nitrophenol catabolism is responsible for 2-chloro-4-nitrophenol degradation in Burkholderia sp. strain SJ98.

Authors:  Jun Min; Jun-Jie Zhang; Ning-Yi Zhou
Journal:  Appl Environ Microbiol       Date:  2014-08-01       Impact factor: 4.792

9.  Crystal structure of PnpCD, a two-subunit hydroquinone 1,2-dioxygenase, reveals a novel structural class of Fe2+-dependent dioxygenases.

Authors:  Shiheng Liu; Tiantian Su; Cong Zhang; Wen-Mao Zhang; Deyu Zhu; Jing Su; Tiandi Wei; Kang Wang; Yan Huang; Liming Guo; Sujuan Xu; Ning-Yi Zhou; Lichuan Gu
Journal:  J Biol Chem       Date:  2015-08-24       Impact factor: 5.157

10.  Metagenomics reveals diversity and abundance of meta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation.

Authors:  Maria V Brennerova; Jirina Josefiova; Vladimir Brenner; Dietmar H Pieper; Howard Junca
Journal:  Environ Microbiol       Date:  2009-02-19       Impact factor: 5.491

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