Literature DB >> 18502517

Image analysis of time-lapse movies--a precision control guided approach to correct motion artefacts.

David Hecker1, Joachim Kappler, Alexander Glassmann, Karl Schilling, Wolfgang Alt.   

Abstract

In long-term time-lapse studies of cell migration, it is often important to distinguish active movement of individual cells from global tissue motion caused, for instance, by morphogenetic changes, or due to artefacts. We have developed a method to define and correct global movements. This is realized by the sequential morphing of image sequences to the initial image based on the position of immobile reference objects. Technically, the approach is implemented in ImageJ, using the plugin UnwarpJ. We describe an efficient way to select parameter settings such as to optimize image correction. To this end, we implemented a strict statistical control that allows to quantify image registration quality. We document this approach using a time-lapse sequence of migrating interneurons in slice cultures of the developing cerebellum.

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Year:  2008        PMID: 18502517     DOI: 10.1016/j.jneumeth.2008.04.010

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  6 in total

Review 1.  Besides Purkinje cells and granule neurons: an appraisal of the cell biology of the interneurons of the cerebellar cortex.

Authors:  Karl Schilling; John Oberdick; Ferdinando Rossi; Stephan L Baader
Journal:  Histochem Cell Biol       Date:  2008-08-02       Impact factor: 4.304

2.  Collective cell migration of thyroid carcinoma cells: a beneficial ability to override unfavourable substrates.

Authors:  Liudmila Lobastova; Dominik Kraus; Alexander Glassmann; Dilaware Khan; Christian Steinhäuser; Christina Wolff; Nadine Veit; Jochen Winter; Rainer Probstmeier
Journal:  Cell Oncol (Dordr)       Date:  2016-11-08       Impact factor: 6.730

Review 3.  Moving into shape: cell migration during the development and histogenesis of the cerebellum.

Authors:  Karl Schilling
Journal:  Histochem Cell Biol       Date:  2018-05-09       Impact factor: 4.304

4.  Exposure to lipopolysaccharide (LPS) reduces contractile response of small airways from GSTCD-/- mice.

Authors:  Bo Liu; Amanda P Henry; Sheyda Azimi; Suzanne Miller; Frank K Lee; Jane C Lee; Kelly Probert; Michael I Kotlikoff; Ian Sayers; Ian P Hall
Journal:  PLoS One       Date:  2019-09-12       Impact factor: 3.240

5.  The Presence of Yin-Yang Effects in the Migration Pattern of Staurosporine-Treated Single versus Collective Breast Carcinoma Cells.

Authors:  Frank A H Meyer; Dominik Kraus; Alexander Glassmann; Nadine Veit; Jochen Winter; Rainer Probstmeier
Journal:  Int J Mol Sci       Date:  2021-11-04       Impact factor: 5.923

6.  Automated filtering of intrinsic movement artifacts during two-photon intravital microscopy.

Authors:  Denis Soulet; Alexandre Paré; Julien Coste; Steve Lacroix
Journal:  PLoS One       Date:  2013-01-11       Impact factor: 3.240

  6 in total

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