Literature DB >> 18498778

Physical, kinetic and spectrophotometric studies of a NAD(P)-dependent benzaldehyde dehydrogenase from Pseudomonas putida ATCC 12633.

Catherine K Yeung1, Alejandra Yep, George L Kenyon, Michael J McLeish.   

Abstract

The mandelate pathway of Pseudomonas putida ATCC 12633 comprises five enzymes and catalyzes the conversion of R- and S-mandelamide to benzoic acid which subsequently enters the beta-ketoadipate pathway. Although the first four enzymes have been extensively characterized the terminal enzyme, a NAD(P)+-dependent benzaldehyde dehydrogenase (BADH), remains largely undescribed. Here we report that BADH is a dimer in solution, and that DTT is necessary both to maintain the activity of BADH and to prevent oligimerization of the enzyme. Site-directed mutagenesis confirms that Cys249 is the catalytic cysteine and identifies Cys140 as the cysteine likely to be involved in inter-monomer disulfide formation. BADH can utilize a range of aromatic substrates and will also operate efficiently with cyclohexanal as well as medium-chain aliphatic aldehydes. The logV and logV/K pH-rate profiles for benzaldehyde with either NAD+ or NADP+ as the coenzyme are both bell-shaped. The pKa values on the ascending limb range from 6.2 to 7.1 while those on the descending limb range from 9.6 to 9.9. A spectrophotometric approach was used to show that the pKa of Cys249 was 8.4, i.e., Cys249 is not responsible for the pKas observed in the pH-rate profiles.

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Year:  2008        PMID: 18498778     DOI: 10.1016/j.bbapap.2008.04.015

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  2 in total

1.  Structure and mechanism of benzaldehyde dehydrogenase from Pseudomonas putida ATCC 12633, a member of the Class 3 aldehyde dehydrogenase superfamily.

Authors:  Megan P D Zahniser; Shreenath Prasad; Malea M Kneen; Cheryl A Kreinbring; Gregory A Petsko; Dagmar Ringe; Michael J McLeish
Journal:  Protein Eng Des Sel       Date:  2017-03-01       Impact factor: 1.650

2.  Expression, purification and preliminary crystallographic studies of NahF, a salicylaldehyde dehydrogenase from Pseudomonas putida G7 involved in naphthalene degradation.

Authors:  Juliana Barbosa Coitinho; Débora Maria Abrantes Costa; Samuel Leite Guimarães; Alfredo Miranda de Góes; Ronaldo Alves Pinto Nagem
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-12-24
  2 in total

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