Literature DB >> 18498062

Phylogenetic proximity revealed by neurodevelopmental event timings.

Radhakrishnan Nagarajan1, Barbara Clancy.   

Abstract

Statistical properties such as distribution and correlation signatures were investigated using a temporal database of common neurodevelopmental events in the three species most frequently used in experimental studies, rat, mouse, and macaque. There was a fine nexus between phylogenetic proximity and empirically derived dates of the occurrences of 40 common events including the neurogenesis of cortical layers and outgrowth milestones of developing axonal projections. Exponential and power-law approximations to the distribution of the events reveal strikingly similar decay patterns in rats and mice when compared to macaques. Subsequent hierarchical clustering of the common event timings also captures phylogenetic proximity, an association further supported by multivariate linear regression data. These preliminary results suggest that statistical analyses of the timing of developmental milestones may offer a novel measure of phylogenetic classifications. This may have added pragmatic value in the specific support it offers for the reliability of rat/mouse comparative modeling, as well as in the broader implications for the potential of meta-analyses using databases assembled from the extensive empirical literature.

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Year:  2008        PMID: 18498062      PMCID: PMC2735472          DOI: 10.1007/s12021-008-9013-2

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  21 in total

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Journal:  Neurotoxicology       Date:  2007-02-15       Impact factor: 4.294

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  5 in total

1.  ttime: an R package for translating the timing of brain development across mammalian species.

Authors:  Radhakrishnan Nagarajan; Richard B Darlington; Barbara L Finlay; Barbara Clancy
Journal:  Neuroinformatics       Date:  2010-10

2.  High Angular Resolution Diffusion MRI Reveals Conserved and Deviant Programs in the Paths that Guide Human Cortical Circuitry.

Authors:  Christine J Charvet; Avilash Das; Jae W Song; Deselyn J Tindal-Burgess; Priya Kabaria; Guangping Dai; Tara Kane; Emi Takahashi
Journal:  Cereb Cortex       Date:  2020-03-14       Impact factor: 5.357

3.  Testing hypotheses of developmental constraints on mammalian brain partition evolution, using marsupials.

Authors:  Alison Carlisle; Lynne Selwood; Lyn A Hinds; Norman Saunders; Mark Habgood; Karine Mardon; Vera Weisbecker
Journal:  Sci Rep       Date:  2017-06-26       Impact factor: 4.379

4.  Cross-species analyses of the cortical GABAergic and subplate neural populations.

Authors:  Barbara Clancy; Terri J Teague-Ross; Radhakrishnan Nagarajan
Journal:  Front Neuroanat       Date:  2009-10-06       Impact factor: 3.856

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Authors:  Radhakrishnan Nagarajan; Jeffrey N Jonkman
Journal:  PLoS One       Date:  2013-01-07       Impact factor: 3.240

  5 in total

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