Literature DB >> 18494706

Development of the appendicularian Oikopleura dioica: culture, genome, and cell lineages.

Hiroki Nishida1.   

Abstract

Appendicularians are planktonic tunicates (urochordates), and retain a swimming tadpole shape throughout their life. Together with ascidians, they are the closest relatives of the vertebrates. Oikopleura dioica is characterized by its simplified life habit and anatomical organization. It has a tiny genome, the smallest ever found in a chordate. Its life cycle is extremely short - about 5 days - and it can be maintained in the laboratory over many generations. Embryos and adults are transparent and consist of a small number of cells. The anatomy of juveniles and adults has been described in detail. Cleavage pattern, cell lineages, and morphogenetic movements during embryogenesis have also been comprehensively documented. A draft genome sequence is now available. These features make this organism a suitable experimental model animal in which genetic manipulations would be feasible, as in Drosophila and Caenorhabditis elegans. In this review, I summarize a hundred years' knowledge on the development throughout the life cycle of this organism. Oikopleura is an attractive organism for developmental and evolutionary studies of chordates. It offers considerable promise for future genetic approaches.

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Year:  2008        PMID: 18494706     DOI: 10.1111/j.1440-169X.2008.01035.x

Source DB:  PubMed          Journal:  Dev Growth Differ        ISSN: 0012-1592            Impact factor:   2.053


  15 in total

1.  Forming a tough shell via an intracellular matrix and cellular junctions in the tail epidermis of Oikopleura dioica (Chordata: Tunicata: Appendicularia).

Authors:  Keisuke Nakashima; Atsuo Nishino; Euichi Hirose
Journal:  Naturwissenschaften       Date:  2011-06-12

2.  Maternal and zygotic transcriptomes in the appendicularian, Oikopleura dioica: novel protein-encoding genes, intra-species sequence variations, and trans-spliced RNA leader.

Authors:  Kai Wang; Tatsuya Omotezako; Kanae Kishi; Hiroki Nishida; Takeshi A Onuma
Journal:  Dev Genes Evol       Date:  2015-06-02       Impact factor: 0.900

3.  A chordate species lacking Nodal utilizes calcium oscillation and Bmp for left-right patterning.

Authors:  Takeshi A Onuma; Momoko Hayashi; Fuki Gyoja; Kanae Kishi; Kai Wang; Hiroki Nishida
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-06       Impact factor: 11.205

4.  RNA interference in the appendicularian Oikopleura dioica reveals the function of the Brachyury gene.

Authors:  Tatsuya Omotezako; Atsuo Nishino; Takeshi A Onuma; Hiroki Nishida
Journal:  Dev Genes Evol       Date:  2013-03-15       Impact factor: 0.900

Review 5.  Tunicate gastrulation.

Authors:  Konner M Winkley; Matthew J Kourakis; Anthony W DeTomaso; Michael T Veeman; William C Smith
Journal:  Curr Top Dev Biol       Date:  2019-11-22       Impact factor: 4.897

6.  Evolutionary changes in the notochord genetic toolkit: a comparative analysis of notochord genes in the ascidian Ciona and the larvacean Oikopleura.

Authors:  Jamie E Kugler; Pierre Kerner; Jean-Marie Bouquet; Di Jiang; Anna Di Gregorio
Journal:  BMC Evol Biol       Date:  2011-01-20       Impact factor: 3.260

Review 7.  Tunicates: exploring the sea shores and roaming the open ocean. A tribute to Thomas Huxley.

Authors:  Patrick Lemaire; Jacques Piette
Journal:  Open Biol       Date:  2015-06       Impact factor: 6.411

8.  Phylostratigraphic profiles in zebrafish uncover chordate origins of the vertebrate brain.

Authors:  Martin Sebastijan Šestak; Tomislav Domazet-Lošo
Journal:  Mol Biol Evol       Date:  2014-11-17       Impact factor: 16.240

9.  Evolutionary loss of peroxisomes--not limited to parasites.

Authors:  Vojtěch Žárský; Jan Tachezy
Journal:  Biol Direct       Date:  2015-12-23       Impact factor: 4.540

10.  DNA interference-mediated screening of maternal factors in the chordate Oikopleura dioica.

Authors:  Tatsuya Omotezako; Masaki Matsuo; Takeshi A Onuma; Hiroki Nishida
Journal:  Sci Rep       Date:  2017-03-10       Impact factor: 4.379

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