Literature DB >> 18490829

Dipolar C[triple-bond]N...C[triple-bond]N interactions in organic crystal structures: database analysis and calculation of interaction energies.

Peter A Wood1, Simon J Borwick, David J Watkin, W D Samuel Motherwell, Frank H Allen.   

Abstract

The Cambridge Structural Database (CSD) has been used to study nonbonded interactions between dipolar cyano groups. The analysis shows that C[triple-bond]N...C[triple-bond]N interactions form in an analogous manner to those involving carbonyl groups, and with the same interaction motifs: a dominant antiparallel dimer (57.5%) together with smaller populations of perpendicular (19.4%) and sheared parallel (23.0%) motifs. Ab initio calculations using intermolecular perturbation theory (IMPT) show an attractive C[triple-bond]N...C[triple-bond]N interaction in the dominant antiparallel dimer, with E(t) = -20.0 kJ mol(-1) at d(C...N) = 3.30 A and with the motif having a shear angle close to 102 degrees . The antiparallel C[triple-bond]N...C[triple-bond]N interaction is therefore slightly weaker than the analogous C=O...C=O dimer (-23.5 kJ mol(-1)), but both interactions have attractive energies similar to that of a medium-strength hydrogen bond and, where sterically favoured, they are important in the stabilization of extended crystal structures.

Entities:  

Year:  2008        PMID: 18490829     DOI: 10.1107/S0108768108010239

Source DB:  PubMed          Journal:  Acta Crystallogr B        ISSN: 0108-7681


  1 in total

1.  Orthogonal dipolar interactions between amide carbonyl groups.

Authors:  Felix R Fischer; Peter A Wood; Frank H Allen; François Diederich
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-03       Impact factor: 11.205

  1 in total

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