Literature DB >> 18489160

(13)C-(1)H and (13)C-(13)C NMR J-couplings in (13)C-labeled N-acetyl-neuraminic acid: correlations with molecular structure.

Thomas Klepach1, Wenhui Zhang, Ian Carmichael, Anthony S Serianni.   

Abstract

N-acetyl-neuraminic acid (Neu5Ac, 2) was prepared enzymatically containing single sites of (13)C-enrichment at C1, C2, and C3. Aqueous solutions of the three (13)C isotopomers were studied by (1)H and (13)C NMR spectroscopy at p(2)H 2 and pH 8 to obtain J(CH) and J(CC) values involving the labeled carbons. Experimental studies were complemented by DFT calculations of the same set of J-couplings in protonated and ionized structural mimics of 2 to determine how well theoretical predictions match the experimental findings in saccharides bearing ionizable functionality. Results show that: (a) (2)J(C2,H3ax/eq) values in 2 depend on anomeric configuration, thus complementing (3)J(C1,H3ax/eq) behavior, (b) J(CH) and J(CC) values involving C2 depend on anomeric configuration, the C1-C2 bond torsion, and solution pH, and (c) long-range (4)J(C2,H7) is sensitive to glycerol side-chain conformation. Intraring J(HH) and most (2)J(CH), (3)J(CH), (2)J(CC), and (3)J(CC) involving C1-C3 of 2 appear largely unaffected by the ionization state of the carboxyl group. In vacuo and solvated DFT calculations of geminal and vicinal J(CH) and J(CC) values are similar and reproduce the experimental data well, but better agreement with experiment was observed for (1)J(C1,C2) in the solvated calculations. The present work provides new information for future treatments of trans-glycoside couplings involving Neu5Ac residues by (a) providing new standard values of intraring J(CC) for coupling pathways that mimic those for trans-glycoside J(CC), (b) identifying potential effects of solution pH on trans-glycoside couplings inferred through the behavior of related intraring couplings, and (c) providing specific guidelines for more reliable DFT predictions of J(CH) and J(CC) values in ionizable saccharides.

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Year:  2008        PMID: 18489160     DOI: 10.1021/jo702204x

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  3 in total

1.  Evidence for helical structure in a tetramer of α2-8 sialic acid: unveiling a structural antigen.

Authors:  Marcos D Battistel; Michael Shangold; Loc Trinh; Joseph Shiloach; Darón I Freedberg
Journal:  J Am Chem Soc       Date:  2012-06-22       Impact factor: 15.419

2.  Identification and Quantification of Glycans in Whole Cells: Architecture of Microalgal Polysaccharides Described by Solid-State Nuclear Magnetic Resonance.

Authors:  Alexandre Poulhazan; Malitha C Dickwella Widanage; Artur Muszyński; Alexandre A Arnold; Dror E Warschawski; Parastoo Azadi; Isabelle Marcotte; Tuo Wang
Journal:  J Am Chem Soc       Date:  2021-11-04       Impact factor: 15.419

3.  Molecular Conformations of Di-, Tri-, and Tetra-α-(2→8)-Linked Sialic Acid from NMR Spectroscopy and MD Simulations.

Authors:  Aysegül Turupcu; Markus Blaukopf; Paul Kosma; Chris Oostenbrink
Journal:  Int J Mol Sci       Date:  2019-12-19       Impact factor: 6.208

  3 in total

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