Literature DB >> 18487948

In pursuit of the first recognized epigenetic signal--DNA methylation: a 1976 to 2008 synopsis.

Walter Doerfler1.   

Abstract

A synopsis will be presented of work on DNA methylation, the first epigenetic signal to be recognized. In the author's laboratory, the following problems dealing with DNA methylation have been addressed over the past 32 years: (1) The de novo methylation of foreign DNA integrated into mammalian genomes. (2) Inverse correlations between promoter methylation and activity. (3) The long-term inactivating effect of site-specific promoter methylation. (4) Adenovirus E1 functions in trans and a strong enhancer in cis cancel the silencing effect of promoter methylation. (5) Frog virus 3, an iridovirus with a completely CpG-methylated genome. (6) Mechanisms of de novo methylation. (7) Different segments of the genome possess topical methylation memories. (8) Consequences of foreign DNA insertion into mammalian genomes: alterations of DNA methylation in cis and trans. (9) The epigenetic status of an adenovirus transgenome in Ad12-transformed hamster cells. (10) Cell type-specific patterns of DNA methylation: interindividual concordance in the human genome.

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Year:  2008        PMID: 18487948     DOI: 10.4161/epi.3.3.6249

Source DB:  PubMed          Journal:  Epigenetics        ISSN: 1559-2294            Impact factor:   4.528


  17 in total

1.  A distinct DNA-methylation boundary in the 5'- upstream sequence of the FMR1 promoter binds nuclear proteins and is lost in fragile X syndrome.

Authors:  Anja Naumann; Norbert Hochstein; Stefanie Weber; Ellen Fanning; Walter Doerfler
Journal:  Am J Hum Genet       Date:  2009-10-22       Impact factor: 11.025

Review 2.  Epigenetic reprogramming: is deamination key to active DNA demethylation?

Authors:  Marta Teperek-Tkacz; Vincent Pasque; George Gentsch; Anne C Ferguson-Smith
Journal:  Reproduction       Date:  2011-09-12       Impact factor: 3.906

3.  Methylation of human papillomavirus type 16 genome and risk of cervical precancer in a Costa Rican population.

Authors:  Lisa Mirabello; Chang Sun; Arpita Ghosh; Ana C Rodriguez; Mark Schiffman; Nicolas Wentzensen; Allan Hildesheim; Rolando Herrero; Sholom Wacholder; Attila Lorincz; Robert D Burk
Journal:  J Natl Cancer Inst       Date:  2012-03-23       Impact factor: 13.506

Review 4.  [HPV-associated carcinomas of the female genital tract. Molecular mechanisms of development].

Authors:  M Reuschenbach; S Vinokurova; M von Knebel Doeberitz
Journal:  Pathologe       Date:  2011-11       Impact factor: 1.011

5.  BSCTV C2 attenuates the degradation of SAMDC1 to suppress DNA methylation-mediated gene silencing in Arabidopsis.

Authors:  Zhonghui Zhang; Hao Chen; Xiahe Huang; Ran Xia; Qingzhen Zhao; Jianbin Lai; Kunling Teng; Yin Li; Liming Liang; Quansheng Du; Xueping Zhou; Huishan Guo; Qi Xie
Journal:  Plant Cell       Date:  2011-01-18       Impact factor: 11.277

Review 6.  Diversity and evolution of chromatin proteins encoded by DNA viruses.

Authors:  Robson F de Souza; Lakshminarayan M Iyer; L Aravind
Journal:  Biochim Biophys Acta       Date:  2009-10-28

7.  Latent species C adenoviruses in human tonsil tissues.

Authors:  C T Garnett; G Talekar; J A Mahr; W Huang; Y Zhang; D A Ornelles; L R Gooding
Journal:  J Virol       Date:  2008-12-24       Impact factor: 5.103

8.  The dynamic DNA methylomes of double-stranded DNA viruses associated with human cancer.

Authors:  Agustin F Fernandez; Cecilia Rosales; Pilar Lopez-Nieva; Osvaldo Graña; Esteban Ballestar; Santiago Ropero; Jesus Espada; Sonia A Melo; Amaia Lujambio; Mario F Fraga; Irene Pino; Biola Javierre; Francisco J Carmona; Francesco Acquadro; Renske D M Steenbergen; Peter J F Snijders; Chris J Meijer; Pascal Pineau; Anne Dejean; Belen Lloveras; Gabriel Capella; Josep Quer; Maria Buti; Juan-Ignacio Esteban; Helena Allende; Francisco Rodriguez-Frias; Xavier Castellsague; Janos Minarovits; Jordi Ponce; Daniela Capello; Gianluca Gaidano; Juan Cruz Cigudosa; Gonzalo Gomez-Lopez; David G Pisano; Alfonso Valencia; Miguel Angel Piris; Francesc X Bosch; Ellen Cahir-McFarland; Elliott Kieff; Manel Esteller
Journal:  Genome Res       Date:  2009-02-10       Impact factor: 9.043

Review 9.  Epigenetic mechanisms in cerebral ischemia.

Authors:  Sophie Schweizer; Andreas Meisel; Stefanie Märschenz
Journal:  J Cereb Blood Flow Metab       Date:  2013-06-12       Impact factor: 6.200

10.  Zebrafish AID is capable of deaminating methylated deoxycytidines.

Authors:  Hala Abdouni; Justin J King; Mussa Suliman; Matthew Quinlan; Heather Fifield; Mani Larijani
Journal:  Nucleic Acids Res       Date:  2013-04-12       Impact factor: 16.971

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