Literature DB >> 1848669

Accurate transcription of a plant mitochondrial gene in vitro.

P J Hanic-Joyce1, M W Gray.   

Abstract

To investigate transcriptional mechanisms in plant mitochondria, we have developed an accurate and efficient in vitro transcription system consisting of a partially purified wheat mitochondrial extract programmed with cloned DNA templates containing the promoter for the wheat mitochondrial cytochrome oxidase subunit II gene (coxII). Using this system, we localize the coxII promoter to a 372-bp region spanning positions -56 to -427 relative to the coxII translation initiation codon. We show that in vitro transcription of coxII is initiated at position -170, precisely the same site at which transcription is initiated in vivo. Transcription begins within the sequence GTATAGTAAGTA (the initiating nucleotide is underlined), which is similar to the consensus yeast mitochondrial promoter motif, (A/T)TATAAGTA. This is the first in vitro system that faithfully reproduces in vivo transcription of a plant mitochondrial gene.

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Year:  1991        PMID: 1848669      PMCID: PMC359890          DOI: 10.1128/mcb.11.4.2035-2039.1991

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  39 in total

1.  Specificity factor of yeast mitochondrial RNA polymerase. Purification and interaction with core RNA polymerase.

Authors:  A H Schinkel; M J Koerkamp; E P Touw; H F Tabak
Journal:  J Biol Chem       Date:  1987-09-15       Impact factor: 5.157

2.  Precise assignment of the heavy-strand promoter of mouse mitochondrial DNA: cognate start sites are not required for transcriptional initiation.

Authors:  D D Chang; D A Clayton
Journal:  Mol Cell Biol       Date:  1986-09       Impact factor: 4.272

3.  Direct chemical method for sequencing RNA.

Authors:  D A Peattie
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

4.  Promoter selection in human mitochondria involves binding of a transcription factor to orientation-independent upstream regulatory elements.

Authors:  R P Fisher; J N Topper; D A Clayton
Journal:  Cell       Date:  1987-07-17       Impact factor: 41.582

5.  A transcription factor required for promoter recognition by human mitochondrial RNA polymerase. Accurate initiation at the heavy- and light-strand promoters dissected and reconstituted in vitro.

Authors:  R P Fisher; D A Clayton
Journal:  J Biol Chem       Date:  1985-09-15       Impact factor: 5.157

6.  Accurate in vitro transcription of Xenopus laevis mitochondrial DNA from two bidirectional promoters.

Authors:  D F Bogenhagen; B K Yoza
Journal:  Mol Cell Biol       Date:  1986-07       Impact factor: 4.272

Review 7.  Mitochondrial RNA polymerase: dual role in transcription and replication.

Authors:  A H Schinkel; H F Tabak
Journal:  Trends Genet       Date:  1989-05       Impact factor: 11.639

8.  Effect of point mutations on in vitro transcription from the promoter for the large ribosomal RNA gene of yeast mitochondria.

Authors:  A H Schinkel; M J Groot Koerkamp; M H Stuiver; G T Van der Horst; H F Tabak
Journal:  Nucleic Acids Res       Date:  1987-07-24       Impact factor: 16.971

9.  Mitochondrial RNA polymerase of Saccharomyces cerevisiae: composition and mechanism of promoter recognition.

Authors:  A H Schinkel; M J Groot Koerkamp; H F Tabak
Journal:  EMBO J       Date:  1988-10       Impact factor: 11.598

10.  The wheat cytochrome oxidase subunit II gene has an intron insert and three radical amino acid changes relative to maize.

Authors:  L Bonen; P H Boer; M W Gray
Journal:  EMBO J       Date:  1984-11       Impact factor: 11.598

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  25 in total

1.  Characterization of a DNA-binding protein implicated in transcription in wheat mitochondria.

Authors:  T M Ikeda; M W Gray
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

2.  Higher plant mitochondria

Authors: 
Journal:  Plant Cell       Date:  1999-04       Impact factor: 11.277

3.  Gene expression in isolated plant mitochondria: high fidelity of transcription, splicing and editing of a transgene product in electroporated organelles.

Authors:  J C Farré; A Araya
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

4.  Functional analysis of two maize cDNAs encoding T7-like RNA polymerases.

Authors:  C C Chang; J Sheen; M Bligny; Y Niwa; S Lerbs-Mache; D B Stern
Journal:  Plant Cell       Date:  1999-05       Impact factor: 11.277

5.  Sugarbeet minicircular mitochondrial DNAs: high-resolution transcript mapping, transcript abundance and copy number determination.

Authors:  C M Thomas
Journal:  Mol Gen Genet       Date:  1992-09

6.  Sequence analysis of wheat mitochondrial transcripts capped in vitro: definitive identification of transcription initiation sites.

Authors:  P S Covello; M W Gray
Journal:  Curr Genet       Date:  1991-08       Impact factor: 3.886

7.  Transcription of potato mitochondrial 26S rRNA is initiated at its mature 5' end.

Authors:  S Binder; C Thalheim; A Brennicke
Journal:  Curr Genet       Date:  1994 Nov-Dec       Impact factor: 3.886

8.  Characterization of DNA-Binding Proteins from Pea Mitochondria

Authors: 
Journal:  Plant Physiol       Date:  1998-02-01       Impact factor: 8.340

9.  A conserved core element is functionally important for maize mitochondrial promoter activity in vitro.

Authors:  A G Caoile; D B Stern
Journal:  Nucleic Acids Res       Date:  1997-10-15       Impact factor: 16.971

Review 10.  Regulation of gene expression in plant mitochondria.

Authors:  S Binder; A Marchfelder; A Brennicke
Journal:  Plant Mol Biol       Date:  1996-10       Impact factor: 4.076

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