Literature DB >> 18481988

Recognition of nonsense mRNA: towards a unified model.

Oliver Mühlemann1.   

Abstract

Among the different cellular surveillance mechanisms that ensure accurate gene expression, nonsense-mediated mRNA decay rapidly degrades mRNAs harbouring PTCs (premature translation-termination codons) and thereby prevents the accumulation of potentially deleterious proteins with C-terminal truncations. In the present article, I review recent data from yeast, fluitflies, nematode worms and human cells and endeavour to merge these results into a unified model for recognition of nonsense mRNA. According to this model, the distinction between translation termination at PTCs and at 'normal' termination codons relies on the physical distance between the terminating ribosome and PABP [poly(A)-binding protein]. Correct translation termination is promoted by a PABP-mediated signal to the terminating ribosome, whereas the absence of this signal leads to the assembly of an mRNA decay-promoting protein complex including the conserved NMD factors UPF (up-frameshift) 1-3.

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Year:  2008        PMID: 18481988     DOI: 10.1042/BST0360497

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  27 in total

1.  Plant upstream ORFs can trigger nonsense-mediated mRNA decay in a size-dependent manner.

Authors:  Tünde Nyikó; Boglárka Sonkoly; Zsuzsanna Mérai; Anna Hangyáné Benkovics; Dániel Silhavy
Journal:  Plant Mol Biol       Date:  2009-08-04       Impact factor: 4.076

2.  GNRH1 mutations in patients with idiopathic hypogonadotropic hypogonadism.

Authors:  Yee-Ming Chan; Adelaide de Guillebon; Mariarosaria Lang-Muritano; Lacey Plummer; Felecia Cerrato; Sarah Tsiaras; Ariana Gaspert; Hélène B Lavoie; Ching-Hui Wu; William F Crowley; John K Amory; Nelly Pitteloud; Stephanie B Seminara
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-30       Impact factor: 11.205

3.  Functional analysis of the grapevine paralogs of the SMG7 NMD factor using a heterolog VIGS-based gene depletion-complementation system.

Authors:  Anna Hangyáné Benkovics; Tünde Nyikó; Zsuzsanna Mérai; Dániel Silhavy; György Dénes Bisztray
Journal:  Plant Mol Biol       Date:  2011-01-14       Impact factor: 4.076

4.  Upf1 ATPase-dependent mRNP disassembly is required for completion of nonsense- mediated mRNA decay.

Authors:  Tobias M Franks; Guramrit Singh; Jens Lykke-Andersen
Journal:  Cell       Date:  2010-12-10       Impact factor: 41.582

Review 5.  Poly(A) binding proteins: are they all created equal?

Authors:  Dixie J Goss; Frida Esther Kleiman
Journal:  Wiley Interdiscip Rev RNA       Date:  2012-12-13       Impact factor: 9.957

6.  SMD and NMD are competitive pathways that contribute to myogenesis: effects on PAX3 and myogenin mRNAs.

Authors:  Chenguang Gong; Yoon Ki Kim; Collynn F Woeller; Yalan Tang; Lynne E Maquat
Journal:  Genes Dev       Date:  2008-12-18       Impact factor: 11.361

7.  Upf1 senses 3'UTR length to potentiate mRNA decay.

Authors:  J Robert Hogg; Stephen P Goff
Journal:  Cell       Date:  2010-10-29       Impact factor: 41.582

8.  eIF4E-bound mRNPs are substrates for nonsense-mediated mRNA decay in mammalian cells.

Authors:  Simone C Rufener; Oliver Mühlemann
Journal:  Nat Struct Mol Biol       Date:  2013-05-12       Impact factor: 15.369

9.  Noisy splicing, more than expression regulation, explains why some exons are subject to nonsense-mediated mRNA decay.

Authors:  Zhenguo Zhang; Dedong Xin; Ping Wang; Li Zhou; Landian Hu; Xiangyin Kong; Laurence D Hurst
Journal:  BMC Biol       Date:  2009-05-14       Impact factor: 7.431

10.  GTP-dependent structural rearrangement of the eRF1:eRF3 complex and eRF3 sequence motifs essential for PABP binding.

Authors:  Artem V Kononenko; Vladimir A Mitkevich; Gemma C Atkinson; Tanel Tenson; Vera I Dubovaya; Ludmila Yu Frolova; Alexander A Makarov; Vasili Hauryliuk
Journal:  Nucleic Acids Res       Date:  2009-11-11       Impact factor: 16.971

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