Literature DB >> 18481083

Phytochrome-mediated differential gene expression of plant Ran/TC4 small G-proteins.

Yew Lee1, Min-Hee Kim, Seong-Ki Kim, Soo-Hwan Kim.   

Abstract

Ran/TC4 is the only known member of the family of small GTP-binding proteins primarily localized inside the nucleus. We cloned a pea Ran gene (PsRan1) and characterized its expression in tissues, and under different light sources. PsRan1 is a member of a highly homologous multigene family, and it encodes a protein containing plant-specific amino acids in its sequence. It is ubiquitously expressed in pea tissues with high expression in radicles. The amount of total mRNA transcripts representing multiple Ran family members increased in response to very low-fluence R, while the amount of mRNA transcript encoding PsRan1 specifically was not affected by various light treatments. In addition, Ran genes in Arabidopsis were also differentially expressed in various mutants defective in phytochromes or the light-responding HY5 protein, such as phyA, phyB, and hy5. AtRan1 and AtRan3 gene expression was significantly reduced in the phyA mutant background compared to that in Ler-0 wild type plants. AtRan1 expression was also decreased in the phyB background. In contrast, the expression of AtRan2 did not vary in the hy5 and phytochrome mutant backgrounds examined. Interestingly, expression of AtRan1 was significantly reduced in hy5 plants, while AtRan3 expression was increased in the same plants. From these results, we conclude that Ran gene expression is differentially regulated by various light sources and phytochrome-mediated signaling pathways.

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Year:  2008        PMID: 18481083     DOI: 10.1007/s00425-008-0745-x

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  59 in total

Review 1.  Light signals, phytochromes and cross-talk with other environmental cues.

Authors:  Keara A Franklin; Garry C Whitelam
Journal:  J Exp Bot       Date:  2003-12-12       Impact factor: 6.992

2.  Expression profiling of phyB mutant demonstrates substantial contribution of other phytochromes to red-light-regulated gene expression during seedling de-etiolation.

Authors:  James M Tepperman; Matthew E Hudson; Rajnish Khanna; Tong Zhu; Sherman H Chang; Xun Wang; Peter H Quail
Journal:  Plant J       Date:  2004-06       Impact factor: 6.417

3.  Elementary processes of photoperception by phytochrome A for high-irradiance response of hypocotyl elongation in Arabidopsis.

Authors:  T Shinomura; K Uchida; M Furuya
Journal:  Plant Physiol       Date:  2000-01       Impact factor: 8.340

Review 4.  Light signal transduction in higher plants.

Authors:  Meng Chen; Joanne Chory; Christian Fankhauser
Journal:  Annu Rev Genet       Date:  2004       Impact factor: 16.830

5.  The phytochrome apoprotein family in Arabidopsis is encoded by five genes: the sequences and expression of PHYD and PHYE.

Authors:  T Clack; S Mathews; R A Sharrock
Journal:  Plant Mol Biol       Date:  1994-06       Impact factor: 4.076

6.  Interaction between methyl CpG-binding protein and ran GTPase during cell division in tobacco cultured cells.

Authors:  Aiko Yano; Yutaka Kodama; Akiko Koike; Tomotaka Shinya; Hyun-Jung Kim; Mari Matsumoto; Shinjiro Ogita; Yuko Wada; Nir Ohad; Hiroshi Sano
Journal:  Ann Bot       Date:  2006-09-28       Impact factor: 4.357

7.  Characterization of proteins that interact with the GTP-bound form of the regulatory GTPase Ran in Arabidopsis.

Authors:  T Haizel; T Merkle; A Pay; E Fejes; F Nagy
Journal:  Plant J       Date:  1997-01       Impact factor: 6.417

Review 8.  The Ran GTPase: theme and variations.

Authors:  Mary Dasso
Journal:  Curr Biol       Date:  2002-07-23       Impact factor: 10.834

9.  The Arabidopsis HY5 gene encodes a bZIP protein that regulates stimulus-induced development of root and hypocotyl.

Authors:  T Oyama; Y Shimura; K Okada
Journal:  Genes Dev       Date:  1997-11-15       Impact factor: 11.361

10.  An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets.

Authors:  Debbie Winter; Ben Vinegar; Hardeep Nahal; Ron Ammar; Greg V Wilson; Nicholas J Provart
Journal:  PLoS One       Date:  2007-08-08       Impact factor: 3.240

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  4 in total

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Authors:  Vimlendu Bhushan Sinha; Atul Grover; Sadhana Singh; Veena Pande; Zakwan Ahmed
Journal:  Mol Biol Rep       Date:  2014-06-29       Impact factor: 2.316

2.  Small GTP-binding protein PdRanBP regulates vascular tissue development in poplar.

Authors:  Shaofeng Li; Qinjun Huang; Bingyu Zhang; Jianhui Zhang; Xue Liu; Mengzhu Lu; Zanmin Hu; Changjun Ding; Xiaohua Su
Journal:  BMC Genet       Date:  2016-06-29       Impact factor: 2.797

3.  Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress.

Authors:  Aiping Zang; Xiaojie Xu; Steven Neill; Weiming Cai
Journal:  J Exp Bot       Date:  2009-12-16       Impact factor: 6.992

4.  Molecular cloning, structural and expression profiling of DlRan genes during somatic embryogenesis in Dimocarpus longan Lour.

Authors:  Zhizhen Fang; Chengchun Lai; Yaling Zhang; Zhongxiong Lai
Journal:  Springerplus       Date:  2016-02-25
  4 in total

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