Literature DB >> 18480049

Crystal structure of the BARD1 ankyrin repeat domain and its functional consequences.

David Fox1, Isolde Le Trong, Ponni Rajagopal, Peter S Brzovic, Ronald E Stenkamp, Rachel E Klevit.   

Abstract

BARD1 is the constitutive nuclear partner to the breast and ovarian cancer-specific tumor suppressor BRCA1. Together, they form a heterodimeric complex responsible for maintaining genomic stability through nuclear functions involving DNA damage signaling and repair, transcriptional regulation, and cell cycle control. We report the 2.0A structure of the BARD1 ankyrin repeat domain. The structure includes four ankyrin repeats with a non-canonical C-terminal capping ankyrin repeat and a well ordered extended loop preceding the first repeat. Conserved surface features show an acidic patch and an acidic pocket along the surface typically used by ankyrin repeat domains for binding cognate proteins. We also demonstrate that two reported mutations, N470S and V507M, in the ankyrin repeat domain do not result in observable structural defects. These results provide a structural basis for exploring the biological function of the ankyrin repeat domain and for modeling BARD1 isoforms.

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Year:  2008        PMID: 18480049      PMCID: PMC2475683          DOI: 10.1074/jbc.M802333200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  31 in total

1.  The BARD1-CstF-50 interaction links mRNA 3' end formation to DNA damage and tumor suppression.

Authors:  F E Kleiman; J L Manley
Journal:  Cell       Date:  2001-03-09       Impact factor: 41.582

2.  Identification of BARD1 as mediator between proapoptotic stress and p53-dependent apoptosis.

Authors:  I Irminger-Finger; W C Leung; J Li; M Dubois-Dauphin; J Harb; A Feki; C E Jefford; J V Soriano; M Jaconi; R Montesano; K H Krause
Journal:  Mol Cell       Date:  2001-12       Impact factor: 17.970

3.  ARP/wARP and molecular replacement.

Authors:  A Perrakis; M Harkiolaki; K S Wilson; V S Lamzin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-09-21

4.  Structure of a BRCA1-BARD1 heterodimeric RING-RING complex.

Authors:  P S Brzovic; P Rajagopal; D W Hoyt; M C King; R E Klevit
Journal:  Nat Struct Biol       Date:  2001-10

Review 5.  The ankyrin repeat as molecular architecture for protein recognition.

Authors:  Leila K Mosavi; Tobin J Cammett; Daniel C Desrosiers; Zheng-Yu Peng
Journal:  Protein Sci       Date:  2004-06       Impact factor: 6.725

6.  Coot: model-building tools for molecular graphics.

Authors:  Paul Emsley; Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

7.  Mutational analysis of BARD1 in familial breast cancer patients in Japan.

Authors:  Makoto Ishitobi; Yasuo Miyoshi; Seiichi Hasegawa; Chiyomi Egawa; Yasuhiro Tamaki; Morito Monden; Shinzaburo Noguchi
Journal:  Cancer Lett       Date:  2003-10-08       Impact factor: 8.679

8.  Nuclear-cytoplasmic translocation of BARD1 is linked to its apoptotic activity.

Authors:  Charles Edward Jefford; Anis Feki; Jean Harb; Karl-Heinz Krause; Irmgard Irminger-Finger
Journal:  Oncogene       Date:  2004-04-29       Impact factor: 9.867

9.  High-affinity binders selected from designed ankyrin repeat protein libraries.

Authors:  H Kaspar Binz; Patrick Amstutz; Andreas Kohl; Michael T Stumpp; Christophe Briand; Patrik Forrer; Markus G Grütter; Andreas Plückthun
Journal:  Nat Biotechnol       Date:  2004-04-18       Impact factor: 54.908

10.  Detection of protein folding defects caused by BRCA1-BRCT truncation and missense mutations.

Authors:  R Scott Williams; Daniel I Chasman; D Duong Hau; Benjamin Hui; Albert Y Lau; J N Mark Glover
Journal:  J Biol Chem       Date:  2003-10-08       Impact factor: 5.157

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  16 in total

Review 1.  The Chromatin Landscape Channels DNA Double-Strand Breaks to Distinct Repair Pathways.

Authors:  Zulong Chen; Jessica K Tyler
Journal:  Front Cell Dev Biol       Date:  2022-06-08

Review 2.  BRCA1/BARD1 is a nucleosome reader and writer.

Authors:  Samuel R Witus; Weixing Zhao; Peter S Brzovic; Rachel E Klevit
Journal:  Trends Biochem Sci       Date:  2022-03-26       Impact factor: 14.264

3.  Identification of functional SNPs in BARD1 gene and in silico analysis of damaging SNPs: based on data procured from dbSNP database.

Authors:  Ali A Alshatwi; Tarique N Hasan; Naveed A Syed; Gowhat Shafi; B Leena Grace
Journal:  PLoS One       Date:  2012-10-09       Impact factor: 3.240

4.  Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50.

Authors:  Rajan Kumar Choudhary; Mohd Quadir Siddiqui; Pankaj S Thapa; Nikhil Gadewal; Senthil Kumar Nachimuthu; Ashok K Varma
Journal:  Sci Rep       Date:  2017-06-20       Impact factor: 4.379

5.  Antagonizing functions of BARD1 and its alternatively spliced variant BARD1δ in telomere stability.

Authors:  Maxim Pilyugin; Pierre-Alain André; Magdalena Ratajska; Alina Kuzniacka; Janusz Limon; Benjamin B Tournier; Julien Colas; Geoff Laurent; Irmgard Irminger-Finger
Journal:  Oncotarget       Date:  2017-02-07

Review 6.  The Effects of Genetic and Epigenetic Alterations of BARD1 on the Development of Non-Breast and Non-Gynecological Cancers.

Authors:  Andrea K Watters; Emily S Seltzer; Danny MacKenzie; Melody Young; Jonathan Muratori; Rama Hussein; Andrej M Sodoma; Julie To; Manrose Singh; Dong Zhang
Journal:  Genes (Basel)       Date:  2020-07-21       Impact factor: 4.096

7.  Pathway Network Analysis of Complex Diseases Based on Multiple Biological Networks.

Authors:  Fang Zheng; Le Wei; Liang Zhao; FuChuan Ni
Journal:  Biomed Res Int       Date:  2018-07-30       Impact factor: 3.411

8.  Mechanisms of BRCA1-BARD1 nucleosome recognition and ubiquitylation.

Authors:  Qi Hu; Maria Victoria Botuyan; Debiao Zhao; Gaofeng Cui; Elie Mer; Georges Mer
Journal:  Nature       Date:  2021-07-28       Impact factor: 49.962

9.  The BARD1 C-terminal domain structure and interactions with polyadenylation factor CstF-50.

Authors:  Ross A Edwards; Megan S Lee; Susan E Tsutakawa; R Scott Williams; I Nazeer; F E Kleiman; John A Tainer; J N Mark Glover
Journal:  Biochemistry       Date:  2008-10-09       Impact factor: 3.162

10.  H4K20me0 marks post-replicative chromatin and recruits the TONSL–MMS22L DNA repair complex.

Authors:  Giulia Saredi; Hongda Huang; Colin M Hammond; Constance Alabert; Simon Bekker-Jensen; Ignasi Forne; Nazaret Reverón-Gómez; Benjamin M Foster; Lucie Mlejnkova; Till Bartke; Petr Cejka; Niels Mailand; Axel Imhof; Dinshaw J Patel; Anja Groth
Journal:  Nature       Date:  2016-06-22       Impact factor: 49.962

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