Literature DB >> 18476867

Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis.

Monica Santos-Mendoza1, Bertrand Dubreucq, Sébastien Baud, François Parcy, Michel Caboche, Loïc Lepiniec.   

Abstract

Seeds represent the main source of nutrients for animals and humans, and knowledge of their biology provides tools for improving agricultural practices and managing genetic resources. There is also tremendous interest in using seeds as a sustainable alternative to fossil reserves for green chemistry. Seeds accumulate large amounts of storage compounds such as carbohydrates, proteins and oils. It would be useful for agro-industrial purposes to produce seeds that accumulate these storage compounds more specifically and at higher levels. The main metabolic pathways necessary for oil, starch or protein accumulation are well characterized. However, the overall regulation of partitioning between the various pathways remains unclear. Such knowledge could provide new molecular tools for improving the qualities of crop seeds (Focks and Benning, 1998, Plant Physiol. 118, 91). Studies to improve understanding of the genetic controls of seed development and metabolism therefore remain a key area of research. In the model plant Arabidopsis, genetic analyses have demonstrated that LEAFY COTYLEDON genes, namely LEC1, LEC2 and FUSCA3 (FUS3), are key transcriptional regulators of seed maturation, together with ABSCISIC ACID INSENSITIVE 3 (ABI3). Interestingly, LEC2, FUS3 and ABI3 are related proteins that all contain a 'B3' DNA-binding domain. In recent years, genetic and molecular studies have shed new light on the intricate regulatory network involving these regulators and their interactions with other factors such as LEC1, PICKLE, ABI5 or WRI1, as well as with sugar and hormonal signaling. Here, we summarize the most recent advances in our understanding of this complex regulatory network and its role in the control of seed maturation.

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Year:  2008        PMID: 18476867     DOI: 10.1111/j.1365-313X.2008.03461.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  144 in total

1.  Seed maturation in Arabidopsis thaliana is characterized by nuclear size reduction and increased chromatin condensation.

Authors:  Martijn van Zanten; Maria A Koini; Regina Geyer; Yongxiu Liu; Vittoria Brambilla; Dorothea Bartels; Maarten Koornneef; Paul Fransz; Wim J J Soppe
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-28       Impact factor: 11.205

2.  Systematic analysis of plant-specific B3 domain-containing proteins based on the genome resources of 11 sequenced species.

Authors:  Yijun Wang; Dexiang Deng; Rong Zhang; Suxin Wang; Yunlong Bian; Zhitong Yin
Journal:  Mol Biol Rep       Date:  2012-05       Impact factor: 2.316

3.  Control and consequences of chromatin compaction during seed maturation in Arabidopsis thaliana.

Authors:  Martijn van Zanten; Annaick Carles; Yong Li; Wim J J Soppe
Journal:  Plant Signal Behav       Date:  2012-03-01

4.  Isolation and characterization of two ABRE-binding proteins: EABF and EABF1 from the oil palm.

Authors:  Vahid Omidvar; Siti Nor Akmar Abdullah; Chai Ling Ho; Maziah Mahmood; Ahmed Bakhit Al-Shanfari
Journal:  Mol Biol Rep       Date:  2012-06-22       Impact factor: 2.316

5.  Storage reserve accumulation in Arabidopsis: metabolic and developmental control of seed filling.

Authors:  Sébastien Baud; Bertrand Dubreucq; Martine Miquel; Christine Rochat; Loïc Lepiniec
Journal:  Arabidopsis Book       Date:  2008-07-24

6.  Acyl-lipid metabolism.

Authors:  Yonghua Li-Beisson; Basil Shorrosh; Fred Beisson; Mats X Andersson; Vincent Arondel; Philip D Bates; Sébastien Baud; David Bird; Allan Debono; Timothy P Durrett; Rochus B Franke; Ian A Graham; Kenta Katayama; Amélie A Kelly; Tony Larson; Jonathan E Markham; Martine Miquel; Isabel Molina; Ikuo Nishida; Owen Rowland; Lacey Samuels; Katherine M Schmid; Hajime Wada; Ruth Welti; Changcheng Xu; Rémi Zallot; John Ohlrogge
Journal:  Arabidopsis Book       Date:  2010-06-11

Review 7.  Systems Biology for Smart Crops and Agricultural Innovation: Filling the Gaps between Genotype and Phenotype for Complex Traits Linked with Robust Agricultural Productivity and Sustainability.

Authors:  Anil Kumar; Rajesh Kumar Pathak; Sanjay Mohan Gupta; Vikram Singh Gaur; Dinesh Pandey
Journal:  OMICS       Date:  2015-10

8.  Basic LEUCINE ZIPPER TRANSCRIPTION FACTOR67 Transactivates DELAY OF GERMINATION1 to Establish Primary Seed Dormancy in Arabidopsis.

Authors:  Fiona M Bryant; David Hughes; Keywan Hassani-Pak; Peter J Eastmond
Journal:  Plant Cell       Date:  2019-04-08       Impact factor: 11.277

9.  ABA-insensitive3, ABA-insensitive5, and DELLAs Interact to activate the expression of SOMNUS and other high-temperature-inducible genes in imbibed seeds in Arabidopsis.

Authors:  Soohwan Lim; Jeongmoo Park; Nayoung Lee; Jinkil Jeong; Shigeo Toh; Asuka Watanabe; Junghyun Kim; Hyojin Kang; Dong Hwan Kim; Naoto Kawakami; Giltsu Choi
Journal:  Plant Cell       Date:  2013-12-10       Impact factor: 11.277

10.  Enhanced accumulation of fatty acids and triacylglycerols in transgenic tobacco stems for enhanced bioenergy production.

Authors:  Akula Nookaraju; Shashank K Pandey; Takeshi Fujino; Ju Young Kim; Mi Chung Suh; Chandrashekhar P Joshi
Journal:  Plant Cell Rep       Date:  2014-03-01       Impact factor: 4.570

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