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Literature DB >> 18476839

De novo assembly and genomic structural variation analysis with genome sequencer FLX 3K long-tag paired end reads.

Thomas Jarvie¹, Timothy Harkins.

Abstract

Mesh：

Substances：
Genetic Markers

Year: 2008 PMID： 18476839 DOI： 10.2144/000112894

Source DB: PubMed Journal: Biotechniques ISSN： 0736-6205 Impact factor: 1.993

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6 in total

1. A cost-effective and universal strategy for complete prokaryotic genomic sequencing proposed by computer simulation.

Authors: Jingwei Jiang; Jun Li; Hoi Shan Kwan; Chun Hang Au; Patrick Tik Wan Law; Lei Li; Kai Man Kam; Julia Mei Lun Ling; Frederick C Leung
Journal: BMC Res Notes Date: 2012-01-31

2. Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens.

Authors: Jihye Park; Ying Zhang; Anne M Buboltz; Xuqing Zhang; Stephan C Schuster; Umesh Ahuja; Minghsun Liu; Jeff F Miller; Mohammed Sebaihia; Stephen D Bentley; Julian Parkhill; Eric T Harvill
Journal: BMC Genomics Date: 2012-10-10 Impact factor: 3.969

3. High throughput sequencing and proteomics to identify immunogenic proteins of a new pathogen: the dirty genome approach.

Authors: Gilbert Greub; Carole Kebbi-Beghdadi; Claire Bertelli; François Collyn; Beat M Riederer; Camille Yersin; Antony Croxatto; Didier Raoult
Journal: PLoS One Date: 2009-12-23 Impact factor: 3.240

De novo assembly and genomic structural variation analysis with genome sequencer FLX 3K long-tag paired end reads.

1. A cost-effective and universal strategy for complete prokaryotic genomic sequencing proposed by computer simulation.

2. Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens.

3. High throughput sequencing and proteomics to identify immunogenic proteins of a new pathogen: the dirty genome approach.

4. Development of a porcine (Sus scofa) embryo-specific microarray: array annotation and validation.

5. Aggressive assembly of pyrosequencing reads with mates.

6. Insights from the complete chloroplast genome into the evolution of Sesamum indicum L.