Literature DB >> 18473465

Pyrene-zipper array assembled via RNA duplex formation.

Mitsunobu Nakamura1, Yohei Murakami, Kazuhiro Sasa, Haruhisa Hayashi, Kazushige Yamana.   

Abstract

We describe a new strategy for multipyrene modification of RNA sequences to form unique structures of pyrene aromatic arrays, the "pyrene-zipper array", on duplex RNA that exhibits remarkably strong excimer fluorescence.

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Year:  2008        PMID： 18473465     DOI： 10.1021/ja801054t

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN： 0002-7863            Impact factor:   15.419


  10 in total

1.  High-affinity DNA targeting using readily accessible mimics of N2'-functionalized 2'-amino-α-L-LNA.

Authors:  Saswata Karmakar; Brooke A Anderson; Rie L Rathje; Sanne Andersen; Troels B Jensen; Poul Nielsen; Patrick J Hrdlicka
Journal:  J Org Chem       Date:  2011-08-09       Impact factor: 4.354

Review 2.  DNA-multichromophore systems.

Authors:  Yin Nah Teo; Eric T Kool
Journal:  Chem Rev       Date:  2012-03-16       Impact factor: 60.622

Review 3.  Pyrene-functionalized oligonucleotides and locked nucleic acids (LNAs): tools for fundamental research, diagnostics, and nanotechnology.

Authors:  Michael E Østergaard; Patrick J Hrdlicka
Journal:  Chem Soc Rev       Date:  2011-04-13       Impact factor: 54.564

Review 4.  25 years and still going strong: 2'-O-(pyren-1-yl)methylribonucleotides - versatile building blocks for applications in molecular biology, diagnostics and materials science.

Authors:  Patrick J Hrdlicka; Saswata Karmakar
Journal:  Org Biomol Chem       Date:  2017-11-29       Impact factor: 3.876

5.  Invader LNA: efficient targeting of short double stranded DNA.

Authors:  Sujay P Sau; T Santhosh Kumar; Patrick J Hrdlicka
Journal:  Org Biomol Chem       Date:  2010-03-04       Impact factor: 3.876

6.  Polyfluorophore labels on DNA: dramatic sequence dependence of quenching.

Authors:  Yin Nah Teo; James N Wilson; Eric T Kool
Journal:  Chemistry       Date:  2009-11-02       Impact factor: 5.236

7.  Identification and characterization of second-generation invader locked nucleic acids (LNAs) for mixed-sequence recognition of double-stranded DNA.

Authors:  Sujay P Sau; Andreas S Madsen; Peter Podbevsek; Nicolai K Andersen; T Santhosh Kumar; Sanne Andersen; Rie L Rathje; Brooke A Anderson; Dale C Guenther; Saswata Karmakar; Pawan Kumar; Janez Plavec; Jesper Wengel; Patrick J Hrdlicka
Journal:  J Org Chem       Date:  2013-09-25       Impact factor: 4.354

8.  Polyfluorophore excimers and exciplexes as FRET donors in DNA.

Authors:  Yin Nah Teo; Eric T Kool
Journal:  Bioconjug Chem       Date:  2009-12       Impact factor: 4.774

Review 9.  Recent Advances in Nucleic Acid Targeting Probes and Supramolecular Constructs Based on Pyrene-Modified Oligonucleotides.

Authors:  Olga A Krasheninina; Darya S Novopashina; Evgeny K Apartsin; Alya G Venyaminova
Journal:  Molecules       Date:  2017-11-30       Impact factor: 4.411

10.  Pyrene-modified PNAs: Stacking interactions and selective excimer emission in PNA2DNA triplexes.

Authors:  Alex Manicardi; Lucia Guidi; Alice Ghidini; Roberto Corradini
Journal:  Beilstein J Org Chem       Date:  2014-07-02       Impact factor: 2.883
  10 in total

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