Literature DB >> 18471210

Spatial and temporal influences on bacterial profiling of forensic soil samples.

Melissa S Meyers1, David R Foran.   

Abstract

Bacterial content may be helpful in differentiating forensic soil samples; however, the effectiveness of bacterial profiling depends on several factors, including uniqueness among different habitat types, the level of heterogeneity within a habitat, and changes in bacterial communities over time. To examine these, soils from five diverse habitats were tested over a 1 year period using terminal restriction fragment length polymorphism (TRFLP) analysis. Soil samples were collected at central locations monthly, and 10 feet in cardinal directions quarterly. Similarity indices were found to be least related among habitats, while the greatest bacterial similarities existed among collection locations within a habitat. Temporally, however, bacterial content varied considerably, and there was substantial overlap in similarity indices among habitats during different parts of the year. Taken together, the results indicate that while bacterial DNA profiling may be useful for forensic soil analysis, certain variables, particularly time, must be considered.

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Substances:

Year:  2008        PMID: 18471210     DOI: 10.1111/j.1556-4029.2008.00728.x

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  6 in total

1.  Comparison of bacterial DNA profiles of footwear insoles and soles of feet for the forensic discrimination of footwear owners.

Authors:  Haruhisa Goga
Journal:  Int J Legal Med       Date:  2012-06-23       Impact factor: 2.686

2.  Initial insights into bacterial succession during human decomposition.

Authors:  Embriette R Hyde; Daniel P Haarmann; Joseph F Petrosino; Aaron M Lynne; Sibyl R Bucheli
Journal:  Int J Legal Med       Date:  2014-11-28       Impact factor: 2.686

3.  Discrimination among individuals using terminal restriction fragment length polymorphism profiling of bacteria derived from forensic evidence.

Authors:  Eiji Nishi; Yukihiro Tashiro; Kenji Sakai
Journal:  Int J Legal Med       Date:  2014-10-22       Impact factor: 2.686

4.  Bioinformatics Approach to Assess the Biogeographical Patterns of Soil Communities: The Utility for Soil Provenance.

Authors:  Natalie Damaso; Julian Mendel; Maria Mendoza; Eric J von Wettberg; Giri Narasimhan; DeEtta Mills
Journal:  J Forensic Sci       Date:  2018-01-22       Impact factor: 1.832

5.  The living dead: bacterial community structure of a cadaver at the onset and end of the bloat stage of decomposition.

Authors:  Embriette R Hyde; Daniel P Haarmann; Aaron M Lynne; Sibyl R Bucheli; Joseph F Petrosino
Journal:  PLoS One       Date:  2013-10-30       Impact factor: 3.240

6.  Microbial composition analyses by 16S rRNA sequencing: A proof of concept approach to provenance determination of archaeological ochre.

Authors:  Claire E Lenehan; Shanan S Tobe; Renee J Smith; Rachel S Popelka-Filcoff
Journal:  PLoS One       Date:  2017-10-18       Impact factor: 3.240

  6 in total

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