Literature DB >> 18470156

Unusually high numbers of ribosomal RNA genes in copepods (Arthropoda: Crustacea) and their relationship to genome size.

G A Wyngaard, I A McLaren, M M White, J M Sévigny.   

Abstract

We report on copy numbers of 18S ribosomal RNA genes in three species of copepods (Crustacea: Copepoda), two of which possess an unusual arrangement in which 5S genes are included within the 18S-5.8S-28S repeat unit. Slot blots of genomic and standard DNA were hybridized with an 18S rRNA gene probe constructed from one of the marine species and hybridization was quantified using chemiluminescence. Diploid 18S rRNA gene copy numbers are estimated as ca. 15 300 and 33 500 in the marine species Calanus finmarchicus (13.0 pg DNA in 2C adult nuclei) and C. glacialis (24.2 pg DNA), respectively, and ca. 840 and 730 in two freshwater populations of Mesocyclops edax (both ca. 3 pg DNA) from Virginia and Nova Scotia, respectively. The roughly proportional relationship between 2C somatic nuclear DNA contents and rRNA gene copy number in the sibling species C. finmarchicus and C. glacialis may reflect polytenic replication of entire genomes during abrupt speciation events. Copy numbers may also reflect differential losses during embryonic chromatin diminution.

Entities:  

Year:  1995        PMID: 18470156     DOI: 10.1139/g95-012

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  5 in total

1.  Biogeography and diversity of Collodaria (Radiolaria) in the global ocean.

Authors:  Tristan Biard; Estelle Bigeard; Stéphane Audic; Julie Poulain; Andres Gutierrez-Rodriguez; Stéphane Pesant; Lars Stemmann; Fabrice Not
Journal:  ISME J       Date:  2017-03-24       Impact factor: 10.302

2.  Eukaryotic and cyanobacterial communities associated with marine snow particles in the oligotrophic Sargasso Sea.

Authors:  Regitze B C Lundgreen; Cornelia Jaspers; Sachia J Traving; Daniel J Ayala; Fabien Lombard; Hans-Peter Grossart; Torkel G Nielsen; Peter Munk; Lasse Riemann
Journal:  Sci Rep       Date:  2019-06-20       Impact factor: 4.379

3.  Bacterial biofilm colonization and succession in tropical marine waters are similar across different types of stone materials used in seawall construction.

Authors:  Stephen Summers; Y Shona Pek; Deepthi P Vinod; Diane McDougald; Peter A Todd; William R Birch; Scott A Rice
Journal:  Front Microbiol       Date:  2022-07-25       Impact factor: 6.064

4.  Highlighting the promise of qPCR-based environmental monitoring: response of the ribosomal RNA:DNA ratio of calanoid copepods to toxic cyanobacteria.

Authors:  Aabir Banerji; Ruta Deshpande; Michael Elk; Jody A Shoemaker; Dan R Tettenhorst; Mark Bagley; Jorge W Santo Domingo
Journal:  Ecotoxicology       Date:  2021-03-06       Impact factor: 2.935

5.  Mitochondrial genomes of the key zooplankton copepods Arctic Calanus glacialis and North Atlantic Calanus finmarchicus with the longest crustacean non-coding regions.

Authors:  Agata Weydmann; Aleksandra Przyłucka; Marek Lubośny; Katarzyna S Walczyńska; Ester A Serrão; Gareth A Pearson; Artur Burzyński
Journal:  Sci Rep       Date:  2017-10-20       Impact factor: 4.379

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.