Literature DB >> 18470055

C-banded karyotypes and polymorphisms in hexaploid oat accessions (Avena spp.) using Wright's stain.

E N Jellen, R L Phillips, H W Rines.   

Abstract

A chromosome C-banding protocol using Wright's stain was employed to compare chromosomes in cultivars and wild accessions of several hexaploid oat taxa (Avena spp.). This technique permits the identification of each of the 21 somatic hexaploid oat chromosomes. Digital images of C-banded cells were captured on computer and used to construct karyotypes of several oat accessions. Polymorphisms for C-bands among oat cultivars and wild accessions are described. These banding polymorphisms can be used to trace introgression of chromosomes from wild sources and to provide physical markers on the genetic map for oat. Although C-banding permits the identification of likely C-genome chromosomes based on comparisons with C-banding patterns in diploid and tetraploid Avena species, the A and D genomes cannot be readily differentiated based on their banding patterns.

Entities:  

Year:  1993        PMID: 18470055     DOI: 10.1139/g93-151

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  13 in total

1.  Phylogenetic inferences in Avena based on analysis of FL intron2 sequences.

Authors:  Yuan-Ying Peng; Yu-Ming Wei; Bernard R Baum; Ze-Hong Yan; Xiu-Jin Lan; Shou-Fen Dai; You-Liang Zheng
Journal:  Theor Appl Genet       Date:  2010-06-01       Impact factor: 5.699

2.  Identification of homoeologous chromosomes in hexaploid oat (A. byzantina cv Kanota) using monosomics and RFLP analysis.

Authors:  W L Rooney; E N Jellen; R L Phillips; H W Rines; S F Kianian
Journal:  Theor Appl Genet       Date:  1994-10       Impact factor: 5.699

3.  New Diversity Arrays Technology (DArT) markers for tetraploid oat (Avena magna Murphy et Terrell) provide the first complete oat linkage map and markers linked to domestication genes from hexaploid A. sativa L.

Authors:  R E Oliver; E N Jellen; G Ladizinsky; A B Korol; A Kilian; J L Beard; Z Dumlupinar; N H Wisniewski-Morehead; E Svedin; M Coon; R R Redman; P J Maughan; D E Obert; E W Jackson
Journal:  Theor Appl Genet       Date:  2011-07-31       Impact factor: 5.699

4.  A new chromosome nomenclature system for oat (Avena sativa L. and A. byzantina C. Koch) based on FISH analysis of monosomic lines.

Authors:  M J Sanz; E N Jellen; Y Loarce; M L Irigoyen; E Ferrer; A Fominaya
Journal:  Theor Appl Genet       Date:  2010-07-24       Impact factor: 5.699

5.  Discrimination of the closely related A and D genomes of the hexaploid oat Avena sativa L.

Authors:  C Linares; E Ferrer; A Fominaya
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

6.  C-banding variation in the Moroccan oat species Avena agadiriana (2n=4x=28).

Authors:  E N Jellen; B S Gill
Journal:  Theor Appl Genet       Date:  1996-05       Impact factor: 5.699

7.  Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology.

Authors:  Rebekah E Oliver; Gerard R Lazo; Joseph D Lutz; Marc J Rubenfield; Nicholas A Tinker; Joseph M Anderson; Nicole H Wisniewski Morehead; Dinesh Adhikary; Eric N Jellen; P Jeffrey Maughan; Gina L Brown Guedira; Shiaoman Chao; Aaron D Beattie; Martin L Carson; Howard W Rines; Donald E Obert; J Michael Bonman; Eric W Jackson
Journal:  BMC Genomics       Date:  2011-01-27       Impact factor: 3.969

8.  Chromosomal Behavior during Meiosis in the Progeny of Triticum timopheevii × Hexaploid Wild Oat.

Authors:  Hongzhou An; Mei Hu; Pengfei Li; Guangdong Geng; Qingqin Zhang; Suqin Zhang
Journal:  PLoS One       Date:  2015-05-07       Impact factor: 3.240

9.  Use of Repetitive Sequences for Molecular and Cytogenetic Characterization of Avena Species from Portugal.

Authors:  Diana Tomás; Joana Rodrigues; Ana Varela; Maria Manuela Veloso; Wanda Viegas; Manuela Silva
Journal:  Int J Mol Sci       Date:  2016-02-04       Impact factor: 5.923

10.  SNP discovery and chromosome anchoring provide the first physically-anchored hexaploid oat map and reveal synteny with model species.

Authors:  Rebekah E Oliver; Nicholas A Tinker; Gerard R Lazo; Shiaoman Chao; Eric N Jellen; Martin L Carson; Howard W Rines; Donald E Obert; Joseph D Lutz; Irene Shackelford; Abraham B Korol; Charlene P Wight; Kyle M Gardner; Jiro Hattori; Aaron D Beattie; Åsmund Bjørnstad; J Michael Bonman; Jean-Luc Jannink; Mark E Sorrells; Gina L Brown-Guedira; Jennifer W Mitchell Fetch; Stephen A Harrison; Catherine J Howarth; Amir Ibrahim; Frederic L Kolb; Michael S McMullen; J Paul Murphy; Herbert W Ohm; Brian G Rossnagel; Weikai Yan; Kelci J Miclaus; Jordan Hiller; Peter J Maughan; Rachel R Redman Hulse; Joseph M Anderson; Emir Islamovic; Eric W Jackson
Journal:  PLoS One       Date:  2013-03-22       Impact factor: 3.240

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