Literature DB >> 18469923

A high density RFLP linkage map of sugar beet.

C Halldén, A Hjerdin, I M Rading, B Fridlundh, G Johannisdottir, S Tuvesson, C Akesson, T Säll, N O Nilsson.   

Abstract

A high density sugar beet RFLP map with an average distance of 1.5 cM between markers has been constructed. The map covers 621 cM and includes 413 markers distributed over the nine linkage groups of sugar beet. The map is based on two F2 populations representing two different pairs of parents. The two sets of data were integrated into a single map using 90 markers that were common to both data sets. The quality of the map was assessed in several ways. The common markers were used to investigate how often the loci had been mapped in the same order in the two F2 populations. For closely situated markers (<1.5 cM) the order specified in the map is uncertain, but for markers separated by more than 2 cM the locus order is highly reliable. The error rate of the overall process was estimated at 0.3% by independently repeating the analysis of 41 markers. The map is comparatively short, with a map length corresponding to approximately 1.4 crossovers per bivalent. Another feature of the map is a high degree of clustering of markers along the linkage groups. With the possible exception of linkage group 2, each linkage group shows one major cluster, which in most cases is situated in the centre of the linkage group. Our interpretation is that sugar beet, in comparison with most other species, has an extreme localization of recombination. Key words : sugar beet, linkage, RFLP, clustering.

Entities:  

Year:  1996        PMID: 18469923     DOI: 10.1139/g96-081

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  5 in total

1.  An intersubspecific genetic map of Lens.

Authors:  Y Durán; R Fratini; P García; M Pérez de la Vega
Journal:  Theor Appl Genet       Date:  2003-12-16       Impact factor: 5.699

2.  Positive correlation between recombination rates and levels of genetic variation in natural populations of sea beet (Beta vulgaris subsp. maritima).

Authors:  T Kraft; T Säll; I Magnusson-Rading; N O Nilsson; C Halldén
Journal:  Genetics       Date:  1998-11       Impact factor: 4.562

3.  A genetic linkage map of quinoa ( Chenopodium quinoa) based on AFLP, RAPD, and SSR markers.

Authors:  P J Maughan; A Bonifacio; E N Jellen; M R Stevens; C E Coleman; M Ricks; S L Mason; D E Jarvis; B W Gardunia; D J Fairbanks
Journal:  Theor Appl Genet       Date:  2004-08-12       Impact factor: 5.699

4.  Multi-trait association mapping in sugar beet (Beta vulgaris L.).

Authors:  Benjamin Stich; Hans-Peter Piepho; Britta Schulz; Albrecht E Melchinger
Journal:  Theor Appl Genet       Date:  2008-07-24       Impact factor: 5.699

5.  Comparative effectiveness of sugar beet microsatellite markers isolated from genomic libraries and GenBank ESTs to map the sugar beet genome.

Authors:  V Laurent; P Devaux; T Thiel; F Viard; S Mielordt; P Touzet; M C Quillet
Journal:  Theor Appl Genet       Date:  2007-07-24       Impact factor: 5.574

  5 in total

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