Literature DB >> 18456855

Use of laser microdissection for phylogenetic characterization of polyphosphate-accumulating bacteria.

Stefanie Gloess1, Hans-Peter Grossart, Martin Allgaier, Stefan Ratering, Michael Hupfer.   

Abstract

Our novel approach for taxonomic identification of uncultured bacteria harboring specific physiological features in complex environmental samples combines cell collection by laser microdissection and subsequent DNA analysis. The newly developed approach was successfully tested for collection and phylogenetic characterization of polyphosphate-accumulating bacteria in activated sludge and lake sediment.

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Year:  2008        PMID： 18456855      PMCID： PMC2446515          DOI： 10.1128/AEM.02545-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  30 in total

1.  Stable-isotope probing as a tool in microbial ecology.

Authors:  S Radajewski; P Ineson; N R Parekh; J C Murrell
Journal:  Nature       Date:  2000-02-10       Impact factor: 49.962

2.  Methane-consuming archaea revealed by directly coupled isotopic and phylogenetic analysis.

Authors:  V J Orphan; C H House; K U Hinrichs; K D McKeegan; E F DeLong
Journal:  Science       Date:  2001-07-20       Impact factor: 47.728

Review 3.  Laser microdissection: exploring host-bacterial encounters at the front lines.

Authors:  Lora V Hooper
Journal:  Curr Opin Microbiol       Date:  2004-06       Impact factor: 7.934

4.  Cell surface hydrophobicity and mycolic acid composition of Rhodococcus strains isolated from activated sludge foam.

Authors:  H M Stratton; P R Brooks; P C Griffiths; R J Seviour
Journal:  J Ind Microbiol Biotechnol       Date:  2002-05       Impact factor: 3.346

5.  Atypical polyphosphate accumulation by the denitrifying bacterium Paracoccus denitrificans.

Authors:  Y Barak; J van Rijn
Journal:  Appl Environ Microbiol       Date:  2000-03       Impact factor: 4.792

6.  Selective enrichment and characterization of a phosphorus-removing bacterial consortium from activated sludge.

Authors:  J Hollender; U Dreyer; L Kornberger; P Kämpfer; W Dott
Journal:  Appl Microbiol Biotechnol       Date:  2002-01       Impact factor: 4.813

7.  Microenvironments and microbial community structure in sediments.

Authors:  S P C Tankéré; D G Bourne; F L L Muller; V Torsvik
Journal:  Environ Microbiol       Date:  2002-02       Impact factor: 5.491

8.  Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function.

Authors:  Wei E Huang; Kilian Stoecker; Robert Griffiths; Lyndsay Newbold; Holger Daims; Andrew S Whiteley; Michael Wagner
Journal:  Environ Microbiol       Date:  2007-08       Impact factor: 5.491

9.  Novosphingobium tardaugens sp. nov., an oestradiol-degrading bacterium isolated from activated sludge of a sewage treatment plant in Tokyo.

Authors:  Katsuhiko Fujii; Masataka Satomi; Naoki Morita; Taizo Motomura; Tadaharu Tanaka; Shintaro Kikuchi
Journal:  Int J Syst Evol Microbiol       Date:  2003-01       Impact factor: 2.747

10.  Chryseobacterium defluvii sp. nov., isolated from wastewater.

Authors:  Peter Kämpfer; Ute Dreyer; Alexander Neef; Wolfgang Dott; Hans-Jürgen Busse
Journal:  Int J Syst Evol Microbiol       Date:  2003-01       Impact factor: 2.747
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  1 in total

1.  Bacterial communities of two ubiquitous Great Barrier Reef corals reveals both site- and species-specificity of common bacterial associates.

Authors:  E Charlotte E Kvennefors; Eugenia Sampayo; Tyrone Ridgway; Andrew C Barnes; Ove Hoegh-Guldberg
Journal:  PLoS One       Date:  2010-04-29       Impact factor: 3.240
  1 in total

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