Literature DB >> 18453555

Mireval: a web tool for simple microRNA prediction in genome sequences.

William Ritchie1, François-Xavier Théodule, Daniel Gautheret.   

Abstract

SUMMARY: We have developed an online tool called mirEval which can search sequences of up to 10 000 nt for novel microRNAs in multiple organisms. It is a comprehensive tool, easy to use and very informative. It will allow users with no prior knowledge of in-silico detection of microRNAs to take advantage of the most successful approaches to investigate sequences of interest. AVAILABILITY: The mirEval web server is available at http://tagc.univ-mrs.fr/mireval

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Year:  2008        PMID： 18453555     DOI： 10.1093/bioinformatics/btn137

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  19 in total

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Journal:  Bioinformatics       Date:  2013-09-18       Impact factor: 6.937

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Authors:  Wei-Jen Chung; Phaedra Agius; Jakub O Westholm; Michael Chen; Katsutomo Okamura; Nicolas Robine; Christina S Leslie; Eric C Lai
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Journal:  Mol Biol Rep       Date:  2014-03-28       Impact factor: 2.316

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Journal:  PLoS One       Date:  2013-06-21       Impact factor: 3.240

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Journal:  PLoS One       Date:  2011-02-16       Impact factor: 3.240

8.  MiRPara: a SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences.

Authors:  Yonggan Wu; Bo Wei; Haizhou Liu; Tianxian Li; Simon Rayner
Journal:  BMC Bioinformatics       Date:  2011-04-19       Impact factor: 3.169

9.  Experimental verification of a predicted intronic microRNA in human NGFR gene with a potential pro-apoptotic function.

Authors:  Sepideh Parsi; Bahram M Soltani; Ebrahim Hosseini; Samaneh E Tousi; Seyed J Mowla
Journal:  PLoS One       Date:  2012-04-27       Impact factor: 3.240

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Journal:  PLoS One       Date:  2012-09-25       Impact factor: 3.240
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