Literature DB >> 18450704

Sulfurihydrogenibium rodmanii sp. nov., a sulfur-oxidizing chemolithoautotroph from the Uzon Caldera, Kamchatka Peninsula, Russia, and emended description of the genus Sulfurihydrogenibium.

Andrew H O'Neill1, Yitai Liu, Isabel Ferrera, Terry J Beveridge, Anna-Louise Reysenbach.   

Abstract

Four thermophilic, sulfur-oxidizing, chemolithoautotrophic strains with >99 % 16S rRNA gene sequence similarity were isolated from terrestrial hot springs in the Geyser Valley and the Uzon Caldera, Kamchatka, Russia. One strain, designated UZ3-5T, was characterized fully. Cells of UZ3-5T were Gram-negative, motile, slightly oval rods (about 0.7 microm wide and 1.0 microm long) with multiple polar flagella. All four strains were obligately microaerophilic chemolithoautotrophs and could use elemental sulfur or thiosulfate as electron donors and oxygen (1-14 %, v/v) as the electron acceptor. Strain UZ3-5T grew at temperatures between 55 and 80 degrees C (optimally at 75 degrees C; 1.1 h doubling time), at pH 5.0-7.2 (optimally at pH 6.0-6.3) and at 0-0.9 % NaCl (optimally in the absence of NaCl). The G+C content of the genomic DNA of strain UZ3-5T was 35 mol%. Phylogenetic analysis revealed that strain UZ3-5T was a member of the genus Sulfurihydrogenibium, its closest relative in culture being Sulfurihydrogenibium azorense Az-Fu1T (98.3 % 16S rRNA gene sequence similarity). On the basis of its physiological and molecular characteristics, strain UZ3-5T represents a novel species of the genus Sulfurihydrogenibium, for which the name Sulfurihydrogenibium rodmanii sp. nov. is proposed. The type strain is UZ3-5T (=OCM 900T =ATCC BAA-1536T =DSM 19533T).

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Year:  2008        PMID: 18450704     DOI: 10.1099/ijs.0.65431-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  10 in total

1.  Microbial diversity and autotrophic activity in Kamchatka hot springs.

Authors:  Alexander Yu Merkel; Nikolay V Pimenov; Igor I Rusanov; Alexander I Slobodkin; Galina B Slobodkina; Ivan Yu Tarnovetckii; Evgeny N Frolov; Arseny V Dubin; Anna A Perevalova; Elizaveta A Bonch-Osmolovskaya
Journal:  Extremophiles       Date:  2016-12-27       Impact factor: 2.395

2.  Molecular analysis of the benthos microbial community in Zavarzin thermal spring (Uzon Caldera, Kamchatka, Russia).

Authors:  Alexey S Rozanov; Alla V Bryanskaya; Tatiana K Malup; Irina A Meshcheryakova; Elena V Lazareva; Oksana P Taran; Timofey V Ivanisenko; Vladimir A Ivanisenko; Sergey M Zhmodik; Nikolay A Kolchanov; Sergey E Peltek
Journal:  BMC Genomics       Date:  2014-12-19       Impact factor: 3.969

3.  Comparative geochemical and microbiological characterization of two thermal pools in the Uzon Caldera, Kamchatka, Russia.

Authors:  Elizabeth A Burgess; Jason M Unrine; Gary L Mills; Christopher S Romanek; Juergen Wiegel
Journal:  Microb Ecol       Date:  2011-11-29       Impact factor: 4.552

4.  Isolation of diverse members of the Aquificales from geothermal springs in Tengchong, China.

Authors:  Brian P Hedlund; Anna-Louise Reysenbach; Liuquin Huang; John C Ong; Zizhang Liu; Jeremy A Dodsworth; Reham Ahmed; Amanda J Williams; Brandon R Briggs; Yitai Liu; Weiguo Hou; Hailiang Dong
Journal:  Front Microbiol       Date:  2015-02-27       Impact factor: 5.640

5.  Productivity and Community Composition of Low Biomass/High Silica Precipitation Hot Springs: A Possible Window to Earth's Early Biosphere?

Authors:  Jeff R Havig; Trinity L Hamilton
Journal:  Life (Basel)       Date:  2019-07-29

6.  Physiology, Metabolism, and Fossilization of Hot-Spring Filamentous Microbial Mats.

Authors:  Yiran Dong; Robert A Sanford; William P Inskeep; Vaibhav Srivastava; Vincent Bulone; Christopher J Fields; Peter M Yau; Mayandi Sivaguru; Dag Ahrén; Kyle W Fouke; Joseph Weber; Charles R Werth; Isaac K Cann; Kathleen M Keating; Radhika S Khetani; Alvaro G Hernandez; Chris Wright; Mark Band; Brian S Imai; Glenn A Fried; Bruce W Fouke
Journal:  Astrobiology       Date:  2019-04-30       Impact factor: 4.335

7.  Diversity and Distribution of a Novel Genus of Hyperthermophilic Aquificae Viruses Encoding a Proof-Reading Family-A DNA Polymerase.

Authors:  Marike Palmer; Brian P Hedlund; Simon Roux; Philippos K Tsourkas; Ryan K Doss; Casey Stamereilers; Astha Mehta; Jeremy A Dodsworth; Michael Lodes; Scott Monsma; Tijana Glavina Del Rio; Thomas W Schoenfeld; Emiley A Eloe-Fadrosh; David A Mead
Journal:  Front Microbiol       Date:  2020-11-12       Impact factor: 5.640

8.  Comparative Metagenomic Analysis of Two Hot Springs From Ourense (Northwestern Spain) and Others Worldwide.

Authors:  María-Eugenia DeCastro; Juan-José Escuder-Rodríguez; Manuel Becerra; Esther Rodríguez-Belmonte; María-Isabel González-Siso
Journal:  Front Microbiol       Date:  2021-11-26       Impact factor: 5.640

9.  Metagenomic and biochemical characterizations of sulfur oxidation metabolism in uncultured large sausage-shaped bacterium in hot spring microbial mats.

Authors:  Satoshi Tamazawa; Kazuto Takasaki; Hideyuki Tamaki; Yoichi Kamagata; Satoshi Hanada
Journal:  PLoS One       Date:  2012-11-21       Impact factor: 3.240

10.  In Situ Gene Expression Responsible for Sulfide Oxidation and CO2 Fixation of an Uncultured Large Sausage-Shaped Aquificae Bacterium in a Sulfidic Hot Spring.

Authors:  Satoshi Tamazawa; Kyosuke Yamamoto; Kazuto Takasaki; Yasuo Mitani; Satoshi Hanada; Yoichi Kamagata; Hideyuki Tamaki
Journal:  Microbes Environ       Date:  2016-06-07       Impact factor: 2.912

  10 in total

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