Literature DB >> 18450479

Variational filtering.

K J Friston1.   

Abstract

This note presents a simple Bayesian filtering scheme, using variational calculus, for inference on the hidden states of dynamic systems. Variational filtering is a stochastic scheme that propagates particles over a changing variational energy landscape, such that their sample density approximates the conditional density of hidden and states and inputs. The key innovation, on which variational filtering rests, is a formulation in generalised coordinates of motion. This renders the scheme much simpler and more versatile than existing approaches, such as those based on particle filtering. We demonstrate variational filtering using simulated and real data from hemodynamic systems studied in neuroimaging and provide comparative evaluations using particle filtering and the fixed-form homologue of variational filtering, namely dynamic expectation maximisation.

Mesh:

Year:  2008        PMID: 18450479     DOI: 10.1016/j.neuroimage.2008.03.017

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  15 in total

Review 1.  Model driven EEG/fMRI fusion of brain oscillations.

Authors:  Pedro A Valdes-Sosa; Jose Miguel Sanchez-Bornot; Roberto Carlos Sotero; Yasser Iturria-Medina; Yasser Aleman-Gomez; Jorge Bosch-Bayard; Felix Carbonell; Tohru Ozaki
Journal:  Hum Brain Mapp       Date:  2009-09       Impact factor: 5.038

2.  Modeling of the hemodynamic responses in block design fMRI studies.

Authors:  Zuyao Y Shan; Margaret J Wright; Paul M Thompson; Katie L McMahon; Gabriella G A M Blokland; Greig I de Zubicaray; Nicholas G Martin; Anna A E Vinkhuyzen; David C Reutens
Journal:  J Cereb Blood Flow Metab       Date:  2013-11-20       Impact factor: 6.200

3.  Structure learning in coupled dynamical systems and dynamic causal modelling.

Authors:  Amirhossein Jafarian; Peter Zeidman; Vladimir Litvak; Karl Friston
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2019-10-28       Impact factor: 4.226

4.  Effective connectivity: influence, causality and biophysical modeling.

Authors:  Pedro A Valdes-Sosa; Alard Roebroeck; Jean Daunizeau; Karl Friston
Journal:  Neuroimage       Date:  2011-04-06       Impact factor: 6.556

5.  Dynamic modeling of neuronal responses in fMRI using cubature Kalman filtering.

Authors:  Martin Havlicek; Karl J Friston; Jiri Jan; Milan Brazdil; Vince D Calhoun
Journal:  Neuroimage       Date:  2011-03-09       Impact factor: 6.556

6.  Nonlinear Bayesian estimation of BOLD signal under non-Gaussian noise.

Authors:  Ali Fahim Khan; Muhammad Shahzad Younis; Khalid Bashir Bajwa
Journal:  Comput Math Methods Med       Date:  2015-01-26       Impact factor: 2.238

7.  Perception and hierarchical dynamics.

Authors:  Stefan J Kiebel; Jean Daunizeau; Karl J Friston
Journal:  Front Neuroinform       Date:  2009-07-20       Impact factor: 4.081

8.  Hierarchical models in the brain.

Authors:  Karl Friston
Journal:  PLoS Comput Biol       Date:  2008-11-07       Impact factor: 4.475

9.  Encoding of naturalistic stimuli by local field potential spectra in networks of excitatory and inhibitory neurons.

Authors:  Alberto Mazzoni; Stefano Panzeri; Nikos K Logothetis; Nicolas Brunel
Journal:  PLoS Comput Biol       Date:  2008-12-12       Impact factor: 4.475

10.  The graphical brain: Belief propagation and active inference.

Authors:  Karl J Friston; Thomas Parr; Bert de Vries
Journal:  Netw Neurosci       Date:  2017-12-31
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