Literature DB >> 18449991

The IMGT/HLA database.

James Robinson1, Steven G E Marsh.   

Abstract

The human leukocyte antigen (HLA) complex is located within the 6p21.3 region on the short arm of human chromosome 6 and contains more than 220 genes of diverse function. Many of the genes encode proteins of the immune system and include many highly polymorphic HLA genes. The naming of new HLA genes and allele sequences and their quality control is the responsibility of the WHO Nomenclature Committee for Factors of the HLA System. The IMGT/HLA Database acts as the repository for these sequences and is recognized as the primary source of up-to-date and accurate HLA sequences. The IMGT/HLA website provides a number of tools for accessing the database: these include allele reports, sequence alignments, and sequence similarity searches. The website is updated every 3 months with all the new and confirmatory sequences submitted to the WHO Nomenclature Committee. Submission of HLA sequences to the committee is possible through the tools provided by the IMGT/HLA Database.

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Year:  2007        PMID: 18449991     DOI: 10.1007/978-1-60327-118-9_3

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  8 in total

1.  Analysis of HLA-ABC locus-specific transcription in normal tissues.

Authors:  Ana Belén García-Ruano; Rosa Méndez; José María Romero; Teresa Cabrera; Francisco Ruiz-Cabello; Federico Garrido
Journal:  Immunogenetics       Date:  2010-09-15       Impact factor: 2.846

Review 2.  MHC class II epitope predictive algorithms.

Authors:  Morten Nielsen; Ole Lund; Søren Buus; Claus Lundegaard
Journal:  Immunology       Date:  2010-04-12       Impact factor: 7.397

3.  The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding.

Authors:  Hao Zhang; Ole Lund; Morten Nielsen
Journal:  Bioinformatics       Date:  2009-03-17       Impact factor: 6.937

4.  MHCcluster, a method for functional clustering of MHC molecules.

Authors:  Martin Thomsen; Claus Lundegaard; Søren Buus; Ole Lund; Morten Nielsen
Journal:  Immunogenetics       Date:  2013-06-18       Impact factor: 2.846

5.  HLA DNA sequence variation among human populations: molecular signatures of demographic and selective events.

Authors:  Stéphane Buhler; Alicia Sanchez-Mazas
Journal:  PLoS One       Date:  2011-02-01       Impact factor: 3.240

6.  The heterogeneous HLA genetic makeup of the Swiss population.

Authors:  Stéphane Buhler; José Manuel Nunes; Grazia Nicoloso; Jean-Marie Tiercy; Alicia Sanchez-Mazas
Journal:  PLoS One       Date:  2012-07-25       Impact factor: 3.240

7.  Evaluation of MHC-II peptide binding prediction servers: applications for vaccine research.

Authors:  Hong Huang Lin; Guang Lan Zhang; Songsak Tongchusak; Ellis L Reinherz; Vladimir Brusic
Journal:  BMC Bioinformatics       Date:  2008-12-12       Impact factor: 3.169

8.  IPD-IMGT/HLA Database.

Authors:  James Robinson; Dominic J Barker; Xenia Georgiou; Michael A Cooper; Paul Flicek; Steven G E Marsh
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

  8 in total

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