Literature DB >> 18439883

Automated SPE-RP-HPLC fractionation of biofluids combined to off-line NMR spectroscopy for biomarker identification in metabonomics.

Serge Rezzi1, Francia Arce Vera, François-Pierre J Martin, Serena Wang, Dennis Lawler, Sunil Kochhar.   

Abstract

NMR-based metabonomics is a valuable and straightforward approach to measuring hundreds of metabolites in complex biofluids. However, metabolite identification is sometimes limited by overlapped signals in NMR spectra. We describe a new methodology using an automated hyphenation of solid phase extraction (SPE) with RP-HPLC combined to NMR spectroscopy, which allowed identification of 72 metabolites of various molecular classes in human urine. This methodology was also successfully applied to the fractionation of a cat urine sample to aid identification of aromatic compounds and felinine. The SPE-RP-HPLC method appears to be a reliable tool to support biomarker discovery in metabonomic studies.

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Year:  2008        PMID: 18439883     DOI: 10.1016/j.jchromb.2008.04.001

Source DB:  PubMed          Journal:  J Chromatogr B Analyt Technol Biomed Life Sci        ISSN: 1570-0232            Impact factor:   3.205


  4 in total

1.  Systems toxicology study of doxorubicin on rats using ultra performance liquid chromatography coupled with mass spectrometry based metabolomics.

Authors:  Jiangshan Wang; Theo Reijmers; Lijuan Chen; Rob Van Der Heijden; Mei Wang; Shuangqing Peng; Thomas Hankemeier; Guowang Xu; Jan Van Der Greef
Journal:  Metabolomics       Date:  2009-05-21       Impact factor: 4.290

2.  The human urine metabolome.

Authors:  Souhaila Bouatra; Farid Aziat; Rupasri Mandal; An Chi Guo; Michael R Wilson; Craig Knox; Trent C Bjorndahl; Ramanarayan Krishnamurthy; Fozia Saleem; Philip Liu; Zerihun T Dame; Jenna Poelzer; Jessica Huynh; Faizath S Yallou; Nick Psychogios; Edison Dong; Ralf Bogumil; Cornelia Roehring; David S Wishart
Journal:  PLoS One       Date:  2013-09-04       Impact factor: 3.240

3.  The application of HPLC and microprobe NMR spectroscopy in the identification of metabolites in complex biological matrices.

Authors:  Zhaoxia Miao; Mengxia Jin; Xia Liu; Wei Guo; Xiangju Jin; Hongyue Liu; Yinghong Wang
Journal:  Anal Bioanal Chem       Date:  2015-03-27       Impact factor: 4.142

4.  Systematic evaluation of extraction methods for multiplatform-based metabotyping: application to the Fasciola hepatica metabolome.

Authors:  Jasmina Saric; Elizabeth J Want; Urs Duthaler; Matthew Lewis; Jennifer Keiser; John P Shockcor; Gordon A Ross; Jeremy K Nicholson; Elaine Holmes; Marina F M Tavares
Journal:  Anal Chem       Date:  2012-08-10       Impact factor: 6.986

  4 in total

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