Literature DB >> 18437261

Spatial-temporal modelling of bacterial colony growth on solid media.

Leonie Z Pipe1, Malcolm J Grimson.   

Abstract

The enormous diversity among bacterial colonies of different species, and among colonies of the same species under different environmental conditions, has long interested microbiologists. Yet it is only comparatively recently that quantitative, rather than merely conceptual, models have been developed to explain the dynamics of bacterial colony formation and growth. Understanding the fundamental processes that drive these dynamics is still at a rudimentary level, though a number of advances have been made. This review traces the history of bacterial colony growth modelling, from the pioneering work of Pirt in the late 1960s, through experimental investigations by Wimpenny and his colleagues in the 1970s, and further models extending from that work to understand complex bacterial colony formations. It concludes with recent results which find that both diameter and height of the colony follow simple power-law behaviour over the entire active growth period (from a few hours to several days old), and that the results of Pirt, Wimpenny and their contemporaries can be re-interpreted.

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Year:  2008        PMID: 18437261     DOI: 10.1039/b708241j

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  15 in total

1.  Bacterial body plans: Colony ontogeny in Serratia marcescens.

Authors:  Tomás Rieger; Zdenek Neubauer; Anna Blahůsková; Fatima Cvrcková; Anton Markos
Journal:  Commun Integr Biol       Date:  2008

2.  Selective sweeps in growing microbial colonies.

Authors:  Kirill S Korolev; Melanie J I Müller; Nilay Karahan; Andrew W Murray; Oskar Hallatschek; David R Nelson
Journal:  Phys Biol       Date:  2012-04-04       Impact factor: 2.583

3.  Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics.

Authors:  William R Harcombe; William J Riehl; Ilija Dukovski; Brian R Granger; Alex Betts; Alex H Lang; Gracia Bonilla; Amrita Kar; Nicholas Leiby; Pankaj Mehta; Christopher J Marx; Daniel Segrè
Journal:  Cell Rep       Date:  2014-05-01       Impact factor: 9.423

4.  A genome-wide screen in Escherichia coli reveals that ubiquinone is a key antioxidant for metabolism of long-chain fatty acids.

Authors:  Shashank Agrawal; Kanchan Jaswal; Anthony L Shiver; Himanshi Balecha; Tapas Patra; Rachna Chaba
Journal:  J Biol Chem       Date:  2017-10-17       Impact factor: 5.157

5.  A Predictive Reaction-diffusion Based Model of E.coli Colony Growth Control.

Authors:  Changhan He; Samat Bayakhmetov; Duane Harris; Yang Kuang; Xiao Wang
Journal:  IEEE Control Syst Lett       Date:  2020-12-23

6.  Patterning of mutually interacting bacterial bodies: close contacts and airborne signals.

Authors:  Jaroslav J Cepl; Irena Pátková; Anna Blahůsková; Fatima Cvrcková; Anton Markos
Journal:  BMC Microbiol       Date:  2010-05-12       Impact factor: 3.605

7.  Growing yeast into cylindrical colonies.

Authors:  Clément Vulin; Jean-Marc Di Meglio; Ariel B Lindner; Adrian Daerr; Andrew Murray; Pascal Hersen
Journal:  Biophys J       Date:  2014-05-20       Impact factor: 4.033

8.  Laser-induced speckle scatter patterns in Bacillus colonies.

Authors:  Huisung Kim; Atul K Singh; Arun K Bhunia; Euiwon Bae
Journal:  Front Microbiol       Date:  2014-10-14       Impact factor: 5.640

Review 9.  Bacterial Colonies in Solid Media and Foods: A Review on Their Growth and Interactions with the Micro-Environment.

Authors:  Sophie Jeanson; Juliane Floury; Valérie Gagnaire; Sylvie Lortal; Anne Thierry
Journal:  Front Microbiol       Date:  2015-12-01       Impact factor: 5.640

10.  Quorum Sensing Desynchronization Leads to Bimodality and Patterned Behaviors.

Authors:  David N Quan; Chen-Yu Tsao; Hsuan-Chen Wu; William E Bentley
Journal:  PLoS Comput Biol       Date:  2016-04-12       Impact factor: 4.475

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