Literature DB >> 18429315

Minimotif miner: a computational tool to investigate protein function, disease, and genetic diversity.

Martin R Schiller1.   

Abstract

The Minimotif Miner Web site contains information on several hundred short functional motifs in a single database, and allows the user to search protein queries for the presence of these motifs. Scoring based on evolutionary conservation, protein surface prediction, and motif frequency can be used in conjunction with other motif programs and the known biology of the query to reduce false-positive predictions and select short motifs for experimental pursuit.

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Year:  2007        PMID: 18429315     DOI: 10.1002/0471140864.ps0212s48

Source DB:  PubMed          Journal:  Curr Protoc Protein Sci        ISSN: 1934-3655


  4 in total

1.  C terminus of the P2X7 receptor: treasure hunting.

Authors:  Helio Miranda Costa-Junior; Flávia Sarmento Vieira; Robson Coutinho-Silva
Journal:  Purinergic Signal       Date:  2011-01-27       Impact factor: 3.765

2.  Skin stem cells orchestrate directional migration by regulating microtubule-ACF7 connections through GSK3β.

Authors:  Xiaoyang Wu; Qing-Tao Shen; Daniel S Oristian; Catherine P Lu; Qinsi Zheng; Hong-Wei Wang; Elaine Fuchs
Journal:  Cell       Date:  2011-02-04       Impact factor: 41.582

Review 3.  Classification of intrinsically disordered regions and proteins.

Authors:  Robin van der Lee; Marija Buljan; Benjamin Lang; Robert J Weatheritt; Gary W Daughdrill; A Keith Dunker; Monika Fuxreiter; Julian Gough; Joerg Gsponer; David T Jones; Philip M Kim; Richard W Kriwacki; Christopher J Oldfield; Rohit V Pappu; Peter Tompa; Vladimir N Uversky; Peter E Wright; M Madan Babu
Journal:  Chem Rev       Date:  2014-04-29       Impact factor: 60.622

4.  The EFF-1A Cytoplasmic Domain Influences Hypodermal Cell Fusions in C. elegans But Is Not Dependent on 14-3-3 Proteins.

Authors:  Jessica H Shinn-Thomas; Jacob J del Campo; Jianjun Wang; William A Mohler
Journal:  PLoS One       Date:  2016-01-22       Impact factor: 3.240

  4 in total

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