Literature DB >> 18428774

Common file formats.

Shonda A Leonard1, Timothy G Littlejohn, Andreas D Baxevanis.   

Abstract

This appendix discusses a few of the file formats frequently encountered in bioinformatics. Specifically, it reviews the rules for generating FASTA files and provides guidance for interpreting NCBI descriptor lines, commonly found in FASTA files. In addition, it reviews the construction of GenBank, Phylip, MSF and Nexus files.

Mesh:

Year:  2007        PMID: 18428774     DOI: 10.1002/0471250953.bia01bs16

Source DB:  PubMed          Journal:  Curr Protoc Bioinformatics        ISSN: 1934-3396


  2 in total

1.  TextFormats: Simplifying the definition and parsing of text formats in bioinformatics.

Authors:  Giorgio Gonnella
Journal:  PLoS One       Date:  2022-05-26       Impact factor: 3.752

2.  DiProGB: the dinucleotide properties genome browser.

Authors:  Maik Friedel; Swetlana Nikolajewa; Jürgen Sühnel; Thomas Wilhelm
Journal:  Bioinformatics       Date:  2009-07-15       Impact factor: 6.937

  2 in total

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