Literature DB >> 18428733

An overview of Spotfire for gene-expression studies.

Deepak Kaushal1, Clayton W Naeve.   

Abstract

Spotfire DecisionSite for Functional Genomics (referred to here as Spotfire) is a powerful data mining and visualization application with use in many disciplines. This unit provides an overview of Spotfire's utility in analyzing gene expression data obtained from DNA microarray experiments. Analysis of microarray data requires software-based solutions able to handle and manipulate the enormous amount of data generated. Spotfire provides a solution for accessing, analyzing and visualizing data generated from microarray experiments. Spotfire is designed to allow biologists with little or no programming or statistical skills to transform, process, and analyze microarray data.

Mesh:

Year:  2004        PMID: 18428733     DOI: 10.1002/0471250953.bi0707s6

Source DB:  PubMed          Journal:  Curr Protoc Bioinformatics        ISSN: 1934-3396


  3 in total

1.  DNA millichips as a low-cost platform for gene expression analysis.

Authors:  Kurt W Heinrich; Jamison Wolfer; DongGee Hong; Melissa LeBlanc; Michael R Sussman
Journal:  Plant Physiol       Date:  2012-04-13       Impact factor: 8.340

2.  Murine J774 macrophages recognize LPS/IFN-g, non-CpG DNA or two-CpG DNA-containing sequences as immunologically distinct.

Authors:  Lynn Crosby; Warren Casey; Kevin Morgan; Hong Ni; Lawrence Yoon; Marilyn Easton; Mary Misukonis; Gary Burleson; Dipak K Ghosh
Journal:  Nitric Oxide       Date:  2010-01-25       Impact factor: 4.427

3.  Rate-of-Kill (RoK) assays to triage large compound sets for Chagas disease drug discovery: Application to GSK Chagas Box.

Authors:  Juan Cantizani; Pablo Gamallo; Ignacio Cotillo; Raquel Alvarez-Velilla; Julio Martin
Journal:  PLoS Negl Trop Dis       Date:  2021-07-16
  3 in total

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