Literature DB >> 18428093

Software for rapid prototyping in the pharmaceutical and biotechnology industries.

Michael A Kappler1.   

Abstract

The automation of drug discovery methods continues to develop, especially techniques that process information, represent workflow and facilitate decision-making. The magnitude of data and the plethora of questions in pharmaceutical and biotechnology research give rise to the need for rapid prototyping software. This review describes the advantages and disadvantages of three solutions: Competitive Workflow, Taverna and Pipeline Pilot. Each of these systems processes large amounts of data, integrates diverse systems and assists novice programmers and human experts in critical decision-making steps.

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Mesh:

Year:  2008        PMID: 18428093

Source DB:  PubMed          Journal:  Curr Opin Drug Discov Devel        ISSN: 1367-6733


  7 in total

Review 1.  Genome and proteome annotation: organization, interpretation and integration.

Authors:  Gabrielle A Reeves; David Talavera; Janet M Thornton
Journal:  J R Soc Interface       Date:  2009-02-06       Impact factor: 4.118

2.  Prognostic value of HIF-1α expression during fractionated irradiation.

Authors:  L Helbig; A Yaromina; S N Sriramareddy; S Böke; L Koi; H D Thames; M Baumann; D Zips
Journal:  Strahlenther Onkol       Date:  2012-09-29       Impact factor: 3.621

3.  myExperiment: a repository and social network for the sharing of bioinformatics workflows.

Authors:  Carole A Goble; Jiten Bhagat; Sergejs Aleksejevs; Don Cruickshank; Danius Michaelides; David Newman; Mark Borkum; Sean Bechhofer; Marco Roos; Peter Li; David De Roure
Journal:  Nucleic Acids Res       Date:  2010-05-25       Impact factor: 16.971

4.  Scientific workflow systems: Pipeline Pilot and KNIME.

Authors:  Wendy A Warr
Journal:  J Comput Aided Mol Des       Date:  2012-05-27       Impact factor: 3.686

5.  Mycobacterial dihydrofolate reductase inhibitors identified using chemogenomic methods and in vitro validation.

Authors:  Grace Mugumbate; Katherine A Abrahams; Jonathan A G Cox; George Papadatos; Gerard van Westen; Joël Lelièvre; Szymon T Calus; Nicholas J Loman; Lluis Ballell; David Barros; John P Overington; Gurdyal S Besra
Journal:  PLoS One       Date:  2015-03-23       Impact factor: 3.240

Review 6.  Text mining resources for the life sciences.

Authors:  Piotr Przybyła; Matthew Shardlow; Sophie Aubin; Robert Bossy; Richard Eckart de Castilho; Stelios Piperidis; John McNaught; Sophia Ananiadou
Journal:  Database (Oxford)       Date:  2016-11-25       Impact factor: 3.451

7.  MONA - Interactive manipulation of molecule collections.

Authors:  Matthias Hilbig; Sascha Urbaczek; Inken Groth; Stefan Heuser; Matthias Rarey
Journal:  J Cheminform       Date:  2013-08-28       Impact factor: 5.514

  7 in total

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