Literature DB >> 18426777

A geometric flow-based approach for diffusion tensor image segmentation.

Weihong Guo1, Yunmei Chen, Qingguo Zeng.   

Abstract

Diffusion tensor magnetic resonance imaging (DT-MRI, shortened as DTI) produces, from a set of diffusion-weighted magnetic resonance images, tensor-valued images where each voxel is assigned a 3x3 symmetric, positive-definite matrix. This tensor is simply the covariance matrix of a local Gaussian process with zero mean, modelling the average motion of water molecules. We propose a three-dimensional geometric flow-based model to segment the main core of cerebral white matter fibre tracts from DTI. The segmentation is carried out with a front propagation algorithm. The front is a three-dimensional surface that evolves along its normal direction with speed that is proportional to a linear combination of two measures: a similarity measure and a consistency measure. The similarity measure computes the similarity of the diffusion tensors at a voxel and its neighbouring voxels along the normal to the front; the consistency measure is able to speed up the propagation at locations where the evolving front is more consistent with the diffusion tensor field, to remove noise effect to some extent, and thus to improve results. We validate the proposed model and compare it with some other methods using synthetic and human brain DTI data; experimental results indicate that the proposed model improves the accuracy and efficiency in segmentation.

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Year:  2008        PMID: 18426777      PMCID: PMC3268217          DOI: 10.1098/rsta.2008.0042

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  13 in total

1.  In vivo fiber tractography using DT-MRI data.

Authors:  P J Basser; S Pajevic; C Pierpaoli; J Duda; A Aldroubi
Journal:  Magn Reson Med       Date:  2000-10       Impact factor: 4.668

Review 2.  Processing and visualization for diffusion tensor MRI.

Authors:  C-F Westin; S E Maier; H Mamata; A Nabavi; F A Jolesz; R Kikinis
Journal:  Med Image Anal       Date:  2002-06       Impact factor: 8.545

3.  Diffusion tensor magnetic resonance image regularization.

Authors:  O Coulon; D C Alexander; S Arridge
Journal:  Med Image Anal       Date:  2004-03       Impact factor: 8.545

4.  Automatic segmentation of thalamic nuclei from diffusion tensor magnetic resonance imaging.

Authors:  Mette R Wiegell; David S Tuch; Henrik B W Larsson; Van J Wedeen
Journal:  Neuroimage       Date:  2003-06       Impact factor: 6.556

5.  Distortion correction and robust tensor estimation for MR diffusion imaging.

Authors:  J-F Mangin; C Poupon; C Clark; D Le Bihan; I Bloch
Journal:  Med Image Anal       Date:  2002-09       Impact factor: 8.545

6.  Q-ball imaging.

Authors:  David S Tuch
Journal:  Magn Reson Med       Date:  2004-12       Impact factor: 4.668

7.  White matter fiber tract segmentation in DT-MRI using geometric flows.

Authors:  Lisa Jonasson; Xavier Bresson; Patric Hagmann; Olivier Cuisenaire; Reto Meuli; Jean-Philippe Thiran
Journal:  Med Image Anal       Date:  2005-06       Impact factor: 8.545

8.  DTI segmentation by statistical surface evolution.

Authors:  Christophe Lenglet; Mikaël Rousson; Rachid Deriche
Journal:  IEEE Trans Med Imaging       Date:  2006-06       Impact factor: 10.048

9.  Fuzzy nonparametric DTI segmentation for robust cingulum-tract extraction.

Authors:  Suyash P Awate; Hui Zhang; James C Gee
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

10.  White matter tractography using diffusion tensor deflection.

Authors:  Mariana Lazar; David M Weinstein; Jay S Tsuruda; Khader M Hasan; Konstantinos Arfanakis; M Elizabeth Meyerand; Benham Badie; Howard A Rowley; Victor Haughton; Aaron Field; Andrew L Alexander
Journal:  Hum Brain Mapp       Date:  2003-04       Impact factor: 5.038

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  2 in total

1.  Intraoperative real-time querying of white matter tracts during frameless stereotactic neuronavigation.

Authors:  Haytham Elhawary; Haiying Liu; Pratik Patel; Isaiah Norton; Laura Rigolo; Xenophon Papademetris; Nobuhiko Hata; Alexandra J Golby
Journal:  Neurosurgery       Date:  2011-02       Impact factor: 4.654

2.  Adaptive distance metric learning for diffusion tensor image segmentation.

Authors:  Youyong Kong; Defeng Wang; Lin Shi; Steve C N Hui; Winnie C W Chu
Journal:  PLoS One       Date:  2014-03-20       Impact factor: 3.240

  2 in total

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